RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 MEIS2O14770 477 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 WDR46O15213 610 aaKnown RBP14.41□□□□□ -0.1
CLK3-201ENST00000345005 CBFA2T2O43439 604 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 E2F4Q16254 413 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USH1GQ495M9 461 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 USP17L6PQ6QN14 398 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 SPATA20Q8TB22 786 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 KIFC2Q96AC6 838 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 MTMR9Q96QG7 549 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
CLK3-201ENST00000345005 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
CLK3-201ENST00000345005 L2HGDHQ9H9P8 463 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 EDIL3O43854 480 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 SFPQP23246 707 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLK3-201ENST00000345005 TMEM266Q2M3C6 531 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 RAB34Q9BZG1 259 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 ARGLU1Q9NWB6 273 aaPredicted RBP14.41□□□□□ -0.1
CLK3-201ENST00000345005 GGA3Q9NZ52 723 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 MAN1B1Q9UKM7 699 aa14.41□□□□□ -0.1
CLK3-201ENST00000345005 IKBKBO14920 756 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 ATP8B1O43520 1251 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 TDP2O95551 362 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 STAT6P42226 847 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 AFMP43652 599 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
CLK3-201ENST00000345005 USP14P54578 494 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 PDIA5Q14554 519 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 SUPT20HL1Q3ZLR7 823 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 RRAGBQ5VZM2 374 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 PDXDC2PQ6P474 469 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
CLK3-201ENST00000345005 GRAMD1CQ8IYS0 662 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 SCYL3Q8IZE3 742 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 AOPEPQ8N6M6 819 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 MLKLQ8NB16 471 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 RASSF8Q8NHQ8 419 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 PICK1Q9NRD5 415 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 DDX25Q9UHL0 483 aaKnown RBP14.4□□□□□ -0.1
CLK3-201ENST00000345005 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 ZNF215Q9UL58 517 aaPredicted RBP14.4□□□□□ -0.1
CLK3-201ENST00000345005 PHIPQ8WWQ0 1821 aa14.4□□□□□ -0.1
CLK3-201ENST00000345005 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 DDNO94850 711 aaPredicted RBP14.39□□□□□ -0.11
CLK3-201ENST00000345005 CDC25AP30304 524 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 INPP5BP32019 993 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 TECP42680 631 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 TXKP42681 527 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLK3-201ENST00000345005 MORC3Q14149 939 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 CABP7Q86V35 215 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 FCHSD1Q86WN1 690 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
CLK3-201ENST00000345005 GSDMAQ96QA5 445 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
CLK3-201ENST00000345005 TMEM51Q9NW97 253 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 MRPL11Q9Y3B7 192 aaKnown RBP14.39□□□□□ -0.11
CLK3-201ENST00000345005 PARP14Q460N5 1801 aa14.39□□□□□ -0.11
CLK3-201ENST00000345005 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
CLK3-201ENST00000345005 SLC37A4O43826 429 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 CYP3A7P24462 503 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 DPYDQ12882 1025 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 KARSQ15046 597 aaKnown RBP14.38□□□□□ -0.11
CLK3-201ENST00000345005 TERF2Q15554 542 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 CCDC174Q6PII3 467 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 TSPYL1Q9H0U9 437 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 ABCB11O95342 1321 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 PP2D1A8MPX8 630 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 MARCH6O60337 910 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
CLK3-201ENST00000345005 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 SLF1Q9BQI6 1058 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 MAGEF1Q9HAY2 307 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 LRWD1Q9UFC0 647 aa14.38□□□□□ -0.11
CLK3-201ENST00000345005 PHLPP2Q6ZVD8 1323 aa14.37□□□□□ -0.11
CLK3-201ENST00000345005 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
CLK3-201ENST00000345005 OPLAHO14841 1288 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms