RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ARIH2O95376 493 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 MCM5P33992 734 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 PSMC6P62333 389 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 GPR153Q6NV75 609 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 COPS5Q92905 334 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 TAAR1Q96RJ0 339 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 AP5M1Q9H0R1 490 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 MRPL11Q9Y3B7 192 aaKnown RBP16.77■□□□□ 0.28
HMGN3-202ENST00000344726 Q9Y3F1 56 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 CDH23Q9H251 3354 aa16.77■□□□□ 0.28
HMGN3-202ENST00000344726 DCDC2CA8MYV0 355 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 CD4P01730 458 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 RAG1P15918 1043 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 PDE4DQ08499 809 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 DEFB123Q8N688 67 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 MAF1Q9H063 256 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
HMGN3-202ENST00000344726 DDAH1O94760 285 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 NEFLP07196 543 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 RXRAP19793 462 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 HSD17B4P51659 736 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 GHRHRQ02643 423 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
HMGN3-202ENST00000344726 UMODL1Q5DID0 1318 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 CFBP00751 764 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 TIMP1P01033 207 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 LIFRP42702 1097 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 FPGSQ05932 587 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 PIBF1Q8WXW3 757 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 MTMR10Q9NXD2 777 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 SCN10AQ9Y5Y9 1956 aa16.74■□□□□ 0.27
HMGN3-202ENST00000344726 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 CABYRO75952 493 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 PURAQ00577 322 aaKnown RBP16.73■□□□□ 0.27
HMGN3-202ENST00000344726 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
HMGN3-202ENST00000344726 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
HMGN3-202ENST00000344726 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
HMGN3-202ENST00000344726 PPP1R13LQ8WUF5 828 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 NEK1Q96PY6 1258 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 TRPV6Q9H1D0 765 aa16.73■□□□□ 0.27
HMGN3-202ENST00000344726 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 B4GALT4O60513 344 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 CCDC62Q6P9F0 684 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
HMGN3-202ENST00000344726 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.271e-12■■□□□ 13.1
HMGN3-202ENST00000344726 PXMP2Q9NR77 195 aa16.72■□□□□ 0.27
HMGN3-202ENST00000344726 DOCK5Q9H7D0 1870 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 ZEB2O60315 1214 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 MYL3P08590 195 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 CSF2RAP15509 400 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 KIF5BP33176 963 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 CYP2C18P33260 490 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 LY6KQ17RY6 165 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 KCNB2Q92953 911 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 GUCD1Q96NT3 240 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
HMGN3-202ENST00000344726 A6NJR5 290 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 B4DLN1 442 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 TLR3O15455 904 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 RGS20O76081 388 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 NR3C2P08235 984 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 CPT1AP50416 773 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms