RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ATG3Q9NT62 314 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 MTRF1O75570 445 aaKnown RBP19.06■□□□□ 0.64
SMAD4-201ENST00000342988 NBPF9Q3BBW0 867 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 RRM2BQ7LG56 351 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 SAAL1Q96ER3 474 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 PARVGQ9HBI0 331 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
SMAD4-201ENST00000342988 SEPT3Q9UH03 358 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 EFCAB5A4FU69 1503 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 IMPG1Q17R60 797 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 HORMAD1Q86X24 394 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
SMAD4-201ENST00000342988 PTPN22Q9Y2R2 807 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 TRIM27P14373 513 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 PDCLQ13371 301 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 CDC26Q8NHZ8 85 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 F6X3S4 739 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 SDSP20132 328 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 DRP2Q13474 957 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 SPOPLQ6IQ16 392 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 IQANK1A0A1B0GTG1 560 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 TOM1L1O75674 476 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 ZNF202O95125 648 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 RWDD2BP57060 319 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 KRT39Q6A163 491 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 FLCNQ8NFG4 579 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 TEX28O15482 410 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 IFRD2Q12894 506 aaPredicted RBP19.05■□□□□ 0.64
SMAD4-201ENST00000342988 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
SMAD4-201ENST00000342988 JPH2Q9BR39 696 aaPredicted RBP19.05■□□□□ 0.64
SMAD4-201ENST00000342988 GPBP1L1Q9HC44 474 aaPredicted RBP19.05■□□□□ 0.64
SMAD4-201ENST00000342988 ABCB4P21439 1286 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ACAD11Q709F0 780 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 LAMC2Q13753 1193 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 TAF1BQ53T94 588 aaPredicted RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ANO1Q5XXA6 986 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ADCY7P51828 1080 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 RSRC2Q7L4I2 434 aaKnown RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 CADPS2Q86UW7 1296 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 OSBPL10Q9BXB5 764 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 DISC1Q9NRI5 854 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 RARS2Q5T160 578 aaKnown RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 RNF113AO15541 343 aaKnown RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ANP32DO95626 131 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 SLFN14P0C7P3 912 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 COPB1P53618 953 aaKnown RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 MDM2Q00987 491 aaPredicted RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 CNGA2Q16280 664 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 C10orf76Q5T2E6 689 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ABI1Q8IZP0 508 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 ARHGEF3Q9NR81 526 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 CYTH1Q15438 398 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 EXOC8Q8IYI6 725 aa19.04■□□□□ 0.64
SMAD4-201ENST00000342988 U2AF1L4Q8WU68 220 aaKnown RBP19.04■□□□□ 0.64
SMAD4-201ENST00000342988 SPATA17Q96L03 361 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 EIF2S1P05198 315 aaKnown RBP19.03■□□□□ 0.64
SMAD4-201ENST00000342988 ZNF75DP51815 510 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 AHI1Q8N157 1196 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 SNX29Q8TEQ0 813 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 TADA3O75528 432 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 RPN1P04843 607 aaKnown RBP19.03■□□□□ 0.64
SMAD4-201ENST00000342988 RCSD1Q6JBY9 416 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 MAEAQ7L5Y9 396 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 HOMEZQ8IX15 550 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 GPCPD1Q9NPB8 672 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 NOP53Q9NZM5 478 aaKnown RBP19.03■□□□□ 0.64
SMAD4-201ENST00000342988 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 KIF1CO43896 1103 aaKnown RBP19.03■□□□□ 0.64
SMAD4-201ENST00000342988 GAS7O60861 476 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 GUCA1CO95843 209 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 BIRC5O15392 142 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 MED7O43513 233 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 NBPF20Q3BBV1 942 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 TK2O00142 265 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 SNX2O60749 519 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 TLK2Q86UE8 772 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 C10orf88Q9H8K7 445 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 GOLGA8JA6NMD2 632 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 RHOBTB1O94844 696 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 RASSF7Q02833 373 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 KRR1Q13601 381 aaKnown RBP19.03■□□□□ 0.64
SMAD4-201ENST00000342988 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 INTUQ9ULD6 942 aa19.03■□□□□ 0.64
SMAD4-201ENST00000342988 VPS39Q96JC1 886 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 CHGBP05060 677 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 KIF22Q14807 665 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 CREB3L3Q68CJ9 461 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 NEK8Q86SG6 692 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 DENND2AQ9ULE3 1009 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 SLC26A7Q8TE54 656 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.64
SMAD4-201ENST00000342988 HDAC1Q13547 482 aaPredicted RBP19.02■□□□□ 0.64
SMAD4-201ENST00000342988 GUCY2CP25092 1073 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 TCIRG1Q13488 830 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms