RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 MAGED2Q9UNF1 606 aaPredicted RBP8.11□□□□□ -1.11
LMO7-202ENST00000341547 EXOC7Q9UPT5 735 aa8.11□□□□□ -1.11
LMO7-202ENST00000341547 STXBP3O00186 592 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 MAPK13O15264 365 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PLTPP55058 493 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 SLC12A1Q13621 1099 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PLCB4Q15147 1175 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 RAB20Q9NX57 234 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 DONSONQ9NYP3 566 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PCDHA5Q9Y5H7 936 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 KRT80Q6KB66 452 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 NSUN7Q8NE18 718 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 NSMCE1Q8WV22 266 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 POMGNT1Q8WZA1 660 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 DDX17Q92841 729 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 CACYBPQ9HB71 228 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 FIS1Q9Y3D6 152 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 B4DLN1 442 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PTPRTO14522 1441 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 GNGT2O14610 69 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 POLD1P28340 1107 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PDIA3P30101 505 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 HDLBPQ00341 1268 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 C10orf76Q5T2E6 689 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 SLC30A9Q6PML9 568 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 C4orf50Q6ZRC1 276 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 RIOK1Q9BRS2 568 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 HAUS8Q9BT25 410 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 DRC3Q9H069 523 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 THAP9Q9H5L6 903 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 NHEJ1Q9H9Q4 299 aaPredicted RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 FGFR1OP2Q9NVK5 253 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 UNC13AQ9UPW8 1703 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 NUP153P49790 1475 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 EIF3HO15372 352 aaKnown RBP eCLIP8.1□□□□□ -1.111e-6■■■□□ 18.3
LMO7-202ENST00000341547 MOCS3O95396 460 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 HIPK4Q8NE63 616 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 EPN3Q9H201 632 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PANK4Q9NVE7 773 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 PTCH1Q13635 1447 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 H0Y3Z8 333 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 CRYMQ14894 314 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 TMED2Q15363 201 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 TRMT10CQ7L0Y3 403 aaKnown RBP8.1□□□□□ -1.11
LMO7-202ENST00000341547 NEK9Q8TD19 979 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 DYDC2Q96IM9 177 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 OSBPL9Q96SU4 736 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 MIS12Q9H081 205 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 TMEM51Q9NW97 253 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
LMO7-202ENST00000341547 NONOQ15233 471 aaKnown RBP eCLIP8.09□□□□□ -1.11
LMO7-202ENST00000341547 GRAMD1BQ3KR37 738 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 FAM47AQ5JRC9 791 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 GPBP1Q86WP2 473 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 PPM1KQ8N3J5 372 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ECT2Q9H8V3 914 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 PCDHA13Q9Y5I0 950 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 HOXA7P31268 230 aaPredicted RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 PPP2R2AP63151 447 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ARMCX3Q9UH62 379 aaPredicted RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 PCDHA12Q9UN75 941 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 TAF5LO75529 589 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 MMEP08473 750 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 HSPA6P17066 643 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 HNRNPH1P31943 449 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 LONP1P36776 959 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 MSH2P43246 934 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 DEUP1Q05D60 604 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 MYO1EQ12965 1108 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ZNF658Q5TYW1 1059 aaPredicted RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 FBXW10Q5XX13 1052 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 DHTKD1Q96HY7 919 aaPredicted RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 ATP6V1G3Q96LB4 118 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 TMEM60Q9H2L4 133 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ZNF532Q9HCE3 1301 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 NCF2P19878 526 aaPredicted RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 ITGA6P23229 1130 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 YWHAGP61981 247 aaKnown RBP eCLIP8.09□□□□□ -1.11
LMO7-202ENST00000341547 ITKQ08881 620 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ASPHQ12797 758 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 BFSP1Q12934 665 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 ADCK5Q3MIX3 580 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 COG1Q8WTW3 980 aa8.09□□□□□ -1.11
LMO7-202ENST00000341547 CNOT6LQ96LI5 555 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 ELAC2Q9BQ52 826 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 G3BP2Q9UN86 482 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 EDC4Q6P2E9 1401 aaKnown RBP8.09□□□□□ -1.11
LMO7-202ENST00000341547 NOP56O00567 594 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms