RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 RAD9BQ6WBX8 426 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 PPP2R5EQ16537 467 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
RRP1B-201ENST00000340648 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 VEZTQ9HBM0 779 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 A0A1B0GTH6 734 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 CYP27B1O15528 508 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 CPSF2Q9P2I0 782 aaKnown RBP16.25■□□□□ 0.19
RRP1B-201ENST00000340648 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 AXIN2Q9Y2T1 843 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 COL4A3BPQ9Y5P4 624 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 GAS8O95995 478 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 FOXO4P98177 505 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 NFRKBQ6P4R8 1299 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 WHAMMQ8TF30 809 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
RRP1B-201ENST00000340648 ESYT3A0FGR9 886 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 PLTPP55058 493 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 SARNPP82979 210 aaKnown RBP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 WDR44Q5JSH3 913 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 NCK2O43639 380 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 ADAMTS1Q9UHI8 967 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 H2AFXP16104 143 aaPredicted RBP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 SUGCTQ9HAC7 445 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 FAM114A2Q9NRY5 505 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 PLAAQ9Y263 795 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 PEX19P40855 299 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 RNF10Q8N5U6 811 aaKnown RBP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 CHP1Q99653 195 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 VPS37BQ9H9H4 285 aa16.24■□□□□ 0.19
RRP1B-201ENST00000340648 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
RRP1B-201ENST00000340648 HARSP12081 509 aaKnown RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 REXO1L1PQ8IX06 675 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 KCNB2Q92953 911 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 LMTK2Q8IWU2 1503 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 HIP1RO75146 1068 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CIB2O75838 187 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CFBP00751 764 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 MMS19Q96T76 1030 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 SERPING1P05155 500 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 LIN9Q5TKA1 542 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CEP128Q6ZU80 1094 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 DAAM1Q9Y4D1 1078 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 HMGB1P1B2RPK0 211 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
RRP1B-201ENST00000340648 RIN2Q8WYP3 895 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 BZW2Q9Y6E2 419 aaKnown RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 INO80Q9ULG1 1556 aaPredicted RBP16.23■□□□□ 0.19
RRP1B-201ENST00000340648 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 NR1I3Q14994 352 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 FAM133BQ5BKY9 247 aaKnown RBP16.22■□□□□ 0.19
RRP1B-201ENST00000340648 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 MAGOHBQ96A72 148 aaKnown RBP16.22■□□□□ 0.19
RRP1B-201ENST00000340648 METTL14Q9HCE5 456 aaKnown RBP16.22■□□□□ 0.19
RRP1B-201ENST00000340648 TRIM10Q9UDY6 481 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 FAM205CA6NFA0 338 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 PALMO75781 387 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 ADCY8P40145 1251 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 CCDC38Q502W7 563 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 VPS52Q8N1B4 723 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
RRP1B-201ENST00000340648 USP17L8P0C7I0 530 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 HSPA2P54652 639 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 TCP10Q12799 353 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 ZKSCAN8Q15776 578 aaPredicted RBP16.22■□□□□ 0.19
RRP1B-201ENST00000340648 CAPN12Q6ZSI9 719 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 DYNLL2Q96FJ2 89 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 STK24Q9Y6E0 443 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 ZNF185O15231 689 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 THAP12O43422 761 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 ANTXR2P58335 489 aa16.22■□□□□ 0.19
RRP1B-201ENST00000340648 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.191e-26■■■■■ 39.3
RRP1B-201ENST00000340648 HIBCHQ6NVY1 386 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms