RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZNF512BQ96KM6 892 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 EPB41L5Q9HCM4 733 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PPANQ9NQ55 473 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PCDHA13Q9Y5I0 950 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 MYO1CO00159 1063 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM13AO94988 1023 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 ARHGAP44Q17R89 818 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 JCADQ9P266 1359 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 NTSR2O95665 410 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 ADAM9Q13443 819 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 GTF2A1P52655 376 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 RIOK1Q9BRS2 568 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 SELENOOQ9BVL4 669 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 DPH5Q9H2P9 285 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 CLIC2O15247 247 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 CEP85LQ5SZL2 805 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 DDX12PQ92771 950 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 SELENOSQ9BQE4 189 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 MYO1AQ9UBC5 1043 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 SFI1A8K8P3 1242 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 GJC1P36383 396 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 RPS6KA1Q15418 735 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 IFT20Q8IY31 132 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 ADSSL1Q8N142 457 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 NFAT5O94916 1531 aa12.24□□□□□ -0.45
SEMA4D-201ENST00000339861 RNF225M0QZC1 329 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 SEMA3EO15041 775 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 CFBP00751 764 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 TNNC1P63316 161 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 SP4Q02446 784 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 DGKHQ86XP1 1220 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 HEXIM1O94992 359 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 SARSP49591 514 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 MS4A14Q96JA4 679 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 LTN1O94822 1766 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 NFIXQ14938 502 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 TPH2Q8IWU9 490 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 CAPS2Q9BXY5 557 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 MED4Q9NPJ6 270 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 NFU1Q9UMS0 254 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 PCDHA1Q9Y5I3 950 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 E9PMD0 336 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 VWA3BQ502W6 1294 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 TRIM9Q9C026 710 aa12.23□□□□□ -0.45
SEMA4D-201ENST00000339861 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 LMTK3Q96Q04 1460 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 CYP2J2P51589 502 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 PEX26Q7Z412 305 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 MARCH10Q8NA82 808 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 GSTTP1A0A1W2PQM5 241 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 TCP1P17987 556 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 NR2F2P24468 414 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 AP1M1Q9BXS5 423 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 PDCLQ13371 301 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 BARHL2Q9NY43 387 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
SEMA4D-201ENST00000339861 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms