RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 SEC23AQ15436 765 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 TMEM240Q5SV17 173 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 MFSD5Q6N075 450 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 IL17RAQ96F46 866 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
TREM2-201ENST00000338469 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 SPC25Q9HBM1 224 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 CHD9Q3L8U1 2897 aa13.49□□□□□ -0.25
TREM2-201ENST00000338469 TNKSO95271 1327 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 OPLAHO14841 1288 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 B4GALT4O60513 344 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
TREM2-201ENST00000338469 MCM5P33992 734 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 SMAD3P84022 425 aaKnown RBP13.48□□□□□ -0.25
TREM2-201ENST00000338469 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
TREM2-201ENST00000338469 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 RASIP1Q5U651 963 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
TREM2-201ENST00000338469 RNPC3Q96LT9 517 aaKnown RBP13.48□□□□□ -0.25
TREM2-201ENST00000338469 AP5M1Q9H0R1 490 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 VAT1LQ9HCJ6 419 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 Q9Y3F1 56 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 MYH6P13533 1939 aa13.48□□□□□ -0.25
TREM2-201ENST00000338469 PBX2P40425 430 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
TREM2-201ENST00000338469 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 RUFY3Q7L099 469 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 IQCA1Q86XH1 822 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 SYTL5Q8TDW5 730 aaPredicted RBP13.47□□□□□ -0.25
TREM2-201ENST00000338469 WNT8AQ9H1J5 351 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 KAT14Q9H8E8 782 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
TREM2-201ENST00000338469 CYP46A1Q9Y6A2 500 aa13.47□□□□□ -0.25
TREM2-201ENST00000338469 ERICH2A1L162 156 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 PRC1O43663 620 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 CPA1P15085 419 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 RPS6KB1P23443 525 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 CCL23P55773 120 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 RABEP1Q15276 862 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 CCDC62Q6P9F0 684 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 KIF2CQ99661 725 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 MAD2L2Q9UI95 211 aa13.46□□□□□ -0.25
TREM2-201ENST00000338469 BAZ2BQ9UIF8 2168 aaKnown RBP13.46□□□□□ -0.25
TREM2-201ENST00000338469 VCANP13611 3396 aa13.46□□□□□ -0.26
TREM2-201ENST00000338469 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
TREM2-201ENST00000338469 CYP2C9P11712 490 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 ANTXR2P58335 489 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 EXOSC10Q01780 885 aaKnown RBP13.45□□□□□ -0.26
TREM2-201ENST00000338469 GRIN2CQ14957 1233 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
TREM2-201ENST00000338469 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
TREM2-201ENST00000338469 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
TREM2-201ENST00000338469 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 A6NJR5 290 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
TREM2-201ENST00000338469 CYTH3O43739 400 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 CABYRO75952 493 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 MYL3P08590 195 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
TREM2-201ENST00000338469 NEK4P51957 841 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 FGD1P98174 961 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 PDE4DQ08499 809 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 PWP2Q15269 919 aaKnown RBP13.44□□□□□ -0.26
TREM2-201ENST00000338469 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 SCLYQ96I15 445 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 CTAGE1Q96RT6 745 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 MTA3Q9BTC8 594 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 PDRG1Q9NUG6 133 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 CHD7Q9P2D1 2997 aa13.44□□□□□ -0.26
TREM2-201ENST00000338469 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms