RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SNRPFP62306 86 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 CCZ1BP86790 482 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 CCZ1P86791 482 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 SYCP1Q15431 976 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 MSL1Q68DK7 614 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 USP50Q70EL3 339 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 NOL8Q76FK4 1167 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 IRF2BP1Q8IU81 584 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 REXO1Q8N1G1 1221 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 PROCA1Q8NCQ7 364 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 KIAA1524Q8TCG1 905 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 CFHR5Q9BXR6 569 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 NAT10Q9H0A0 1025 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 CABP5Q9NP86 173 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 RMND1Q9NWS8 449 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 SAP30BPQ9UHR5 308 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 DACH1Q9UI36 760 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 PRR12Q9ULL5 1215 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 PATJQ8NI35 1801 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 MYH11P35749 1972 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 A0A0G2JLL6 359 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 MEIS1O00470 390 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 HOXD8P13378 290 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 RXRAP19793 462 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 ICA1Q05084 483 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 DPCR1Q3MIW9 517 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 TTI2Q6NXR4 508 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 USP17L2Q6R6M4 530 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 NYAP1Q6ZVC0 841 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 PRRT2Q7Z6L0 340 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 BORCS6Q96GS4 357 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 DHTKD1Q96HY7 919 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 RIT2Q99578 217 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 HSD17B14Q9BPX1 270 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 AMNQ9BXJ7 453 aa6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 HOOK1Q9UJC3 728 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 DBR1Q9UK59 544 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-201ENST00000337659 SMCO2A6NFE2 343 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 KINO60870 393 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 PRR29P0C7W0 189 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 SPATA31C1P0DKV0 1188 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 USP14P54578 494 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 CDC37Q16543 378 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RBM26Q5T8P6 1007 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 SPATA1Q5VX52 437 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 SLFN13Q68D06 897 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 VSTM4Q8IW00 320 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 DRC7Q8IY82 874 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 IQUBQ8NA54 791 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 ARHGEF10LQ9HCE6 1279 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RBM47A0AV96 593 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RIMBP2O15034 1052 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RTP1P59025 263 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 MYL5Q02045 173 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 TCEAL1Q15170 157 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 DLGAP5Q15398 846 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RAD54LQ92698 747 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 ZNF622Q969S3 477 aaKnown RBP eCLIP6.07□□□□□ -1.441e-7■■■□□ 18.8
PRPF4B-201ENST00000337659 ZNF341Q9BYN7 854 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 LRRC27Q9C0I9 530 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 TDRD3Q9H7E2 651 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 OLFML3Q9NRN5 406 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 EMILIN3Q9NT22 766 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 ADD3Q9UEY8 706 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 A0A1B0GVL5 298 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 SLC37A4O43826 429 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 RPA1P27694 616 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 MEA1Q16626 185 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 CEP57L1Q8IYX8 460 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 EDEM3Q9BZQ6 932 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 TRIM9Q9C026 710 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 ZNF277Q9NRM2 450 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 PCDHA5Q9Y5H7 936 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 DNAJC25-GNG10A0A024R161 153 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 MAFGO15525 162 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 CNMDO75829 334 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 CD44P16070 742 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 COPB2P35606 906 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 MRPL12P52815 198 aaKnown RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 UNC13DQ70J99 1090 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 SLC9A9Q8IVB4 645 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 GTF3C2Q8WUA4 911 aaPredicted RBP6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
PRPF4B-201ENST00000337659 USP17L10C9JJH3 530 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 EIF3DO15371 548 aaKnown RBP eCLIP6.06□□□□□ -1.447e-7■□□□□ 10.5
PRPF4B-201ENST00000337659 PTPRAP18433 802 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 ME1P48163 572 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 RASGRP2Q7LDG7 609 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 OLIG1Q8TAK6 271 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 CHURC1Q8WUH1 139 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 PANX2Q96RD6 677 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 WBP1LQ9NX94 342 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 SERTAD1Q9UHV2 236 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 TRAF3IP3Q9Y228 551 aa6.06□□□□□ -1.44
PRPF4B-201ENST00000337659 SNCAIPQ9Y6H5 919 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms