RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 FILIP1LQ4L180 1135 aa25.91■■□□□ 1.74
CLPTM1-201ENST00000337392 TBC1D7Q9P0N9 293 aa25.91■■□□□ 1.74
CLPTM1-201ENST00000337392 LIMA1Q9UHB6 759 aaKnown RBP25.91■■□□□ 1.74
CLPTM1-201ENST00000337392 MFAP3LO75121 409 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 ETF1P62495 437 aaKnown RBP25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 TTI2Q6NXR4 508 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 ACRBPQ8NEB7 543 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 CDK5RAP3Q96JB5 506 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 B4DLN1 442 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 STX10O60499 249 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 DPEP1P16444 411 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 ELF2Q15723 593 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 LARGE2Q8N3Y3 721 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 CYP2W1Q8TAV3 490 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 MTMR8Q96EF0 704 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 TFR2Q9UP52 801 aa25.9■■□□□ 1.74
CLPTM1-201ENST00000337392 NPHP3-ACAD11A0A0J9YXS1 232 aa25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 CSGALNACT2Q8N6G5 542 aa25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 LARP4BQ92615 738 aaKnown RBP25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 FGFBP2Q9BYJ0 223 aa25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 TMEM39BQ9GZU3 492 aa25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 MYO3BQ8WXR4 1341 aa25.89■■□□□ 1.74
CLPTM1-201ENST00000337392 MEIS2O14770 477 aa25.89■■□□□ 1.73
CLPTM1-201ENST00000337392 TBC1D5Q92609 795 aa25.89■■□□□ 1.73
CLPTM1-201ENST00000337392 MRPL12P52815 198 aaKnown RBP25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 ERVK-24P63145 666 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 KCNB1Q14721 858 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 CTAGE1Q96RT6 745 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 E9PMD0 336 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 PSMA7O14818 248 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 GNG11P61952 73 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 GLIS2Q9BZE0 524 aaPredicted RBP25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 NYAP2Q9P242 653 aa25.88■■□□□ 1.73
CLPTM1-201ENST00000337392 URI1O94763 535 aaPredicted RBP25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 TFRCP02786 760 aaKnown RBP25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 TMEM179Q6ZVK1 233 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 SV2BQ7L1I2 683 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 ANKRD7Q92527 254 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 CHP1Q99653 195 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 ANO3Q9BYT9 981 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 SEMA6BQ9H3T3 888 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 ATF5Q9Y2D1 282 aaPredicted RBP25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 SPDYE4A6NLX3 237 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 KCNJ6P48051 423 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 FXR2P51116 673 aaKnown RBP eCLIP25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 PPP4R3BQ5MIZ7 849 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 MKL1Q969V6 931 aa25.87■■□□□ 1.73
CLPTM1-201ENST00000337392 POTEB3A0JP26 581 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 LRRC10BA6NIK2 292 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 POTECB2RU33 542 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 hCG_1984214I3L0E3 225 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 KCNA3P22001 575 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 UBXN2AP68543 259 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 TMEM266Q2M3C6 531 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 CT47A1Q5JQC4 288 aaPredicted RBP25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 POTEBQ6S5H4 581 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 ZNF713Q8N859 430 aaPredicted RBP25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 DDX12PQ92771 950 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 C7orf25Q9BPX7 421 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 EPC1Q9H2F5 836 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 PCDHA12Q9UN75 941 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 ERCC6LQ2NKX8 1250 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 PRR16Q569H4 304 aa25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 RBM26Q5T8P6 1007 aaKnown RBP25.86■■□□□ 1.73
CLPTM1-201ENST00000337392 SPDYE2BA6NHP3 402 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 SPDYE6P0CI01 402 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 DGKZQ13574 1117 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 CC2D2BQ6DHV5 1058 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 PDCL2Q8N4E4 241 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 TTLL6Q8N841 843 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 BCAS3Q9H6U6 928 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 ZHX1Q9UKY1 873 aaPredicted RBP25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 ARFGEF1Q9Y6D6 1849 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 TTC26A0AVF1 554 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 H7C1D1 291 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 MEIS1O00470 390 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 OPLAHO14841 1288 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 KRT79Q5XKE5 535 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 FCHSD1Q86WN1 690 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 P2RX5Q93086 422 aa25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 PPP1R1BQ9UD71 204 aaPredicted RBP25.85■■□□□ 1.73
CLPTM1-201ENST00000337392 KRT9P35527 623 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 HDLBPQ00341 1268 aaKnown RBP25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 ABHD10Q9NUJ1 306 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 KIAA1024Q9UPX6 916 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 RAD54LQ92698 747 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 CNOT6LQ96LI5 555 aaKnown RBP25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 MRIQ9BWK5 157 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 PPP4R3AQ6IN85 833 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 RSBN1LQ6PCB5 846 aaPredicted RBP25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 CCDC174Q6PII3 467 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 SMAP1Q8IYB5 467 aaPredicted RBP25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 ADGRG1Q9Y653 693 aa25.84■■□□□ 1.73
CLPTM1-201ENST00000337392 FAM86B1E9PN63 330 aa25.83■■□□□ 1.73
CLPTM1-201ENST00000337392 EGFRP00533 1210 aa25.83■■□□□ 1.73
CLPTM1-201ENST00000337392 FAM86B2P0C5J1 330 aa25.83■■□□□ 1.73
CLPTM1-201ENST00000337392 STIM1Q13586 685 aa25.83■■□□□ 1.73
CLPTM1-201ENST00000337392 FAM83BQ5T0W9 1011 aa25.83■■□□□ 1.73
CLPTM1-201ENST00000337392 DCAF4Q8WV16 495 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms