RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
UBA1-201ENST00000335972 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 AFF2P51816 1311 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 ZNF185O15231 689 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 PRPHP41219 470 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 APBA1Q02410 837 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 FGFBP2Q9BYJ0 223 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 FAM170AA1A519 330 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 CCDC47Q96A33 483 aaKnown RBP16.57■□□□□ 0.24
UBA1-201ENST00000335972 BBOX1O75936 387 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 VSNL1P62760 191 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 MIIPQ5JXC2 388 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
UBA1-201ENST00000335972 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 TANGO6Q9C0B7 1094 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 RIOX1Q9H6W3 641 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 NHEJ1Q9H9Q4 299 aaPredicted RBP16.57■□□□□ 0.24
UBA1-201ENST00000335972 SERPINB13Q9UIV8 391 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 CAPN11Q9UMQ6 739 aa16.57■□□□□ 0.24
UBA1-201ENST00000335972 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
UBA1-201ENST00000335972 SRGNP10124 158 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 STAT3P40763 770 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 DNM2P50570 870 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
UBA1-201ENST00000335972 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
UBA1-201ENST00000335972 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 LAD1O00515 517 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
UBA1-201ENST00000335972 LARP4BQ92615 738 aaKnown RBP16.56■□□□□ 0.24
UBA1-201ENST00000335972 MYO6Q9UM54 1294 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 CTAGE15A4D2H0 777 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 CTAGE8P0CG41 777 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 CTAGE6Q86UF2 777 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 CTAGE4Q8IX94 777 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 DDX12PQ92771 950 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 JAKMIP2Q96AA8 810 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 MTMR9Q96QG7 549 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 FUT8Q9BYC5 575 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 GAKO14976 1311 aa16.56■□□□□ 0.24
UBA1-201ENST00000335972 RGL2O15211 777 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 SHMT1P34896 483 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 TRIM14Q14142 442 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 AK8Q96MA6 479 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 E9PMD0 336 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 N4BP1O75113 896 aaKnown RBP16.55■□□□□ 0.24
UBA1-201ENST00000335972 PHACTR2O75167 634 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 FECHP22830 423 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 DNAJC7Q99615 494 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 MYH1P12882 1939 aa16.55■□□□□ 0.24
UBA1-201ENST00000335972 H3BQF6 201 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 DNA2P51530 1060 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 CEP112Q8N8E3 955 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.242e-7■■■□□ 16.3
UBA1-201ENST00000335972 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
UBA1-201ENST00000335972 TTLL1O95922 423 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 TMEM266Q2M3C6 531 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 C15orf52Q6ZUT6 534 aaKnown RBP16.54■□□□□ 0.24
UBA1-201ENST00000335972 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 GSPT2Q8IYD1 628 aaKnown RBP16.54■□□□□ 0.24
UBA1-201ENST00000335972 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
UBA1-201ENST00000335972 SMARCAL1Q9NZC9 954 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 GDF11O95390 407 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 KRT79Q5XKE5 535 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 NLRC4Q9NPP4 1024 aa16.54■□□□□ 0.24
UBA1-201ENST00000335972 ZNF263O14978 683 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 AMPD3Q01432 767 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 GABPAQ06546 454 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
UBA1-201ENST00000335972 PDE11AQ9HCR9 933 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 USH1GQ495M9 461 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 HAS1Q92839 578 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
UBA1-201ENST00000335972 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
UBA1-201ENST00000335972 A0A1W2PQC6 194 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 MEIS1O00470 390 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 ARID5AQ03989 594 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
UBA1-201ENST00000335972 KCTD19Q17RG1 926 aaPredicted RBP16.52■□□□□ 0.24
UBA1-201ENST00000335972 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 RAD54LQ92698 747 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms