RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 FAM205CA6NFA0 338 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 FOSP01100 380 aaPredicted RBP20.03■□□□□ 0.8
CHGA-202ENST00000334654 AP3B2Q13367 1082 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 CRYGNQ8WXF5 182 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 NUDT12Q9BQG2 462 aa20.03■□□□□ 0.8
CHGA-202ENST00000334654 DAXXQ9UER7 740 aaPredicted RBP20.03■□□□□ 0.8
CHGA-202ENST00000334654 IGHA2P01877 340 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 SAFBQ15424 915 aaKnown RBP eCLIP20.02■□□□□ 0.8
CHGA-202ENST00000334654 DNERQ8NFT8 737 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 SOCS4Q8WXH5 440 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 RMDN3Q96TC7 470 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 ANO3Q9BYT9 981 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 PXMP2Q9NR77 195 aa20.02■□□□□ 0.8
CHGA-202ENST00000334654 DIS3Q9Y2L1 958 aaKnown RBP20.02■□□□□ 0.8
CHGA-202ENST00000334654 DDX49Q9Y6V7 483 aaKnown RBP20.02■□□□□ 0.8
CHGA-202ENST00000334654 FLT3LGP49771 235 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 ALDH5A1P51649 535 aaPredicted RBP20.01■□□□□ 0.79
CHGA-202ENST00000334654 PRKCZQ05513 592 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 MCTP2Q6DN12 878 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 DPP9Q86TI2 863 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 IL31RAQ8NI17 732 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 PDCD2LQ9BRP1 358 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 BRMS1Q9HCU9 246 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 SRRDQ9UH36 339 aa20.01■□□□□ 0.79
CHGA-202ENST00000334654 SPDYE3A6NKU9 549 aa20■□□□□ 0.79
CHGA-202ENST00000334654 BRD1O95696 1058 aa20■□□□□ 0.79
CHGA-202ENST00000334654 GNRH1P01148 92 aa20■□□□□ 0.79
CHGA-202ENST00000334654 PDIA4P13667 645 aaKnown RBP20■□□□□ 0.79
CHGA-202ENST00000334654 LBX1P52954 281 aa20■□□□□ 0.79
CHGA-202ENST00000334654 RESTQ13127 1097 aa20■□□□□ 0.79
CHGA-202ENST00000334654 MCTP1Q6DN14 999 aa20■□□□□ 0.79
CHGA-202ENST00000334654 KRT25Q7Z3Z0 450 aa20■□□□□ 0.79
CHGA-202ENST00000334654 NOSTRINQ8IVI9 506 aa20■□□□□ 0.79
CHGA-202ENST00000334654 MORC4Q8TE76 937 aa20■□□□□ 0.79
CHGA-202ENST00000334654 MAML3Q96JK9 1138 aa20■□□□□ 0.79
CHGA-202ENST00000334654 FLRT1Q9NZU1 646 aa20■□□□□ 0.79
CHGA-202ENST00000334654 LRRC37A2A6NM11 1700 aa20■□□□□ 0.79
CHGA-202ENST00000334654 ZSCAN22P10073 491 aaPredicted RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 EIF2AK2P19525 551 aaKnown RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 CYP2B6P20813 491 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 EDNRBP24530 442 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 SREBF1P36956 1147 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 RGS2P41220 211 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 CTCFP49711 727 aaPredicted RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 UBXN2AP68543 259 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 PGM5Q15124 567 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 PIK3AP1Q6ZUJ8 805 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 OTOP1Q7RTM1 612 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 ZNF467Q7Z7K2 595 aaPredicted RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 FERMT3Q86UX7 667 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 NSUN6Q8TEA1 469 aaKnown RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 NONOQ15233 471 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHGA-202ENST00000334654 CCL14Q16627 93 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 ARHGEF16Q5VV41 709 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 MAMDC4Q6UXC1 1216 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 TBCKQ8TEA7 893 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 APBA2Q99767 749 aa19.99■□□□□ 0.79
CHGA-202ENST00000334654 ADD3Q9UEY8 706 aaKnown RBP19.99■□□□□ 0.79
CHGA-202ENST00000334654 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 WNT7AO00755 349 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 NR3C2P08235 984 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 CYP3A4P08684 503 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 HOXD10P28358 340 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 MRPS9P82933 396 aaKnown RBP19.98■□□□□ 0.79
CHGA-202ENST00000334654 ARHGAP4P98171 946 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 IRF5Q13568 498 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 INF2Q27J81 1249 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 IWS1Q96ST2 819 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 HTTP42858 3142 aa19.98■□□□□ 0.79
CHGA-202ENST00000334654 LOC102724159A0A0B4J2E5 919 aa19.97■□□□□ 0.79
CHGA-202ENST00000334654 TOB1P50616 345 aaPredicted RBP19.97■□□□□ 0.79
CHGA-202ENST00000334654 ARHGEF6Q15052 776 aa19.97■□□□□ 0.79
CHGA-202ENST00000334654 PWP2Q15269 919 aaKnown RBP19.97■□□□□ 0.79
CHGA-202ENST00000334654 FOXD4L5Q5VV16 416 aaPredicted RBP19.97■□□□□ 0.79
CHGA-202ENST00000334654 FOXD4L4Q8WXT5 416 aaPredicted RBP19.97■□□□□ 0.79
CHGA-202ENST00000334654 SLC5A4Q9NY91 659 aa19.97■□□□□ 0.79
CHGA-202ENST00000334654 TRIM17Q9Y577 477 aa19.97■□□□□ 0.79
CHGA-202ENST00000334654 SNAI1O95863 264 aaPredicted RBP19.96■□□□□ 0.79
CHGA-202ENST00000334654 F13A1P00488 732 aa19.96■□□□□ 0.79
CHGA-202ENST00000334654 PCNX4Q63HM2 1172 aa19.96■□□□□ 0.79
CHGA-202ENST00000334654 OLFML2BQ68BL8 750 aa19.96■□□□□ 0.79
CHGA-202ENST00000334654 ZFP91Q96JP5 570 aaPredicted RBP19.96■□□□□ 0.79
CHGA-202ENST00000334654 TINF2Q9BSI4 451 aa19.96■□□□□ 0.79
CHGA-202ENST00000334654 CIZ1Q9ULV3 898 aaPredicted RBP19.96■□□□□ 0.79
CHGA-202ENST00000334654 KIAA1217Q5T5P2 1943 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 MYH15Q9Y2K3 1946 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 RGS20O76081 388 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 CIITAP33076 1130 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 USP11P51784 963 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 PRMT2P55345 433 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 GNL2Q13823 731 aaKnown RBP19.95■□□□□ 0.78
CHGA-202ENST00000334654 FAM173BQ6P4H8 233 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 ARMCX2Q7L311 632 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 BRAPQ7Z569 592 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 MSL3Q8N5Y2 521 aaKnown RBP19.95■□□□□ 0.78
CHGA-202ENST00000334654 TRIB2Q92519 343 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 KATNBL1Q9H079 304 aa19.95■□□□□ 0.78
CHGA-202ENST00000334654 ZSCAN16Q9H4T2 348 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms