RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TRIM15Q9C019 465 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 TMEM60Q9H2L4 133 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 SMYD3Q9H7B4 428 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 A0A0G2JND7 137 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 EXOC1LA0A1B0GW35 172 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 HNRNPCL2B2RXH8 293 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 EYA2O00167 538 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 HNRNPCL1O60812 293 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 P4HA1P13674 534 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 KIF11P52732 1056 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PPM1KQ8N3J5 372 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 C1orf112Q9NSG2 853 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 RGS12O14924 1447 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 KRT14P02533 472 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 ADCY2Q08462 1091 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 FLOT2Q14254 428 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 CC2D1AQ6P1N0 951 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 TRPV6Q9H1D0 765 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 STOML1Q9UBI4 398 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 NVLO15381 856 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 RAD23BP54727 409 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 EXOC3L4Q17RC7 722 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 FAM102BQ5T8I3 360 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 EEF2KMTQ96G04 330 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 KLC4Q9NSK0 619 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 ZFP69BQ9UJL9 534 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 GFAPP14136 432 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 UPF3AQ9H1J1 476 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 NHEJ1Q9H9Q4 299 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 STRIP2Q9ULQ0 834 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 MAP3K5Q99683 1374 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 TTI1O43156 1089 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 LPXNO60711 386 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 HSPA2P54652 639 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PSMD2Q13200 908 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 C1orf146Q5VVC0 180 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 FBXL13Q8NEE6 735 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 CHMP6Q96FZ7 201 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 FMO2Q99518 471 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ANKRD2Q9GZV1 360 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 IKBKBO14920 756 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 REXO1Q8N1G1 1221 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF594Q96JF6 807 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ZMYM6O95789 1325 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 NSFP46459 744 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 YARSP54577 528 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 DR1Q01658 176 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 CSRNP1Q96S65 589 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 MED10Q9BTT4 135 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 AATFQ9NY61 560 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 DBNLQ9UJU6 430 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ENO4A6NNW6 628 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ATP5HO75947 161 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PDZD4Q76G19 769 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 DTNBP1Q96EV8 351 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ANGPTL3Q9Y5C1 460 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PCDHA13Q9Y5I0 950 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ADGRL1O94910 1474 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 SYCE1LA8MT33 242 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 K7ENM7 598 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 STK25O00506 426 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 MYL7Q01449 175 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 FOXD4Q12950 439 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 LLGL1Q15334 1064 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 NBPF20Q3BBV1 942 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 TEX2Q8IWB9 1127 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 SMYD4Q8IYR2 804 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ZCRB1Q8TBF4 217 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 RNF14Q9UBS8 474 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 IPO11Q9UI26 975 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 ARHGAP10A1A4S6 786 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 STAT2P52630 851 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 MRPS15P82914 257 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PRPSAP1Q14558 356 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 NLRP14Q86W24 1093 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 VSTM4Q8IW00 320 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 BLIDQ8IZY5 108 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 DNAJC17Q9NVM6 304 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PPARGC1AQ9UBK2 798 aaKnown RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 MAGED2Q9UNF1 606 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-201ENST00000334504 PCDHA5Q9Y5H7 936 aa10.62□□□□□ -0.71
COL4A6-201ENST00000334504 CA4P22748 312 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 GSPT2Q8IYD1 628 aaKnown RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 RAPGEF5Q92565 580 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 PAIP2BQ9ULR5 123 aaKnown RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 H3BRJ5 948 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms