RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DGKHQ86XP1 1220 aa14.31□□□□□ -0.12
VSTM4-202ENST00000332853 CCDC105Q8IYK2 499 aa14.31□□□□□ -0.12
VSTM4-202ENST00000332853 DHTKD1Q96HY7 919 aaPredicted RBP14.31□□□□□ -0.12
VSTM4-202ENST00000332853 MAGEF1Q9HAY2 307 aa14.31□□□□□ -0.12
VSTM4-202ENST00000332853 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
VSTM4-202ENST00000332853 GOLGA6BA6NDN3 693 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 PRPF6O94906 941 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 IGBP1P78318 339 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 DMP1Q13316 513 aaPredicted RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 EXOC3L4Q17RC7 722 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 RWDD2AQ9UIY3 292 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 GOLGA6CA6NDK9 693 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 GOLGA6DP0CG33 693 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 DISC1Q9NRI5 854 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 GOLGA6AQ9NYA3 693 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 KRT26Q7Z3Y9 468 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 DCPSQ96C86 337 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 POLGP54098 1239 aaPredicted RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 EXOSC10Q01780 885 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 TRIM28Q13263 835 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 MICALL1Q8N3F8 863 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 GPR161Q8N6U8 529 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 ENOX1Q8TC92 643 aaKnown RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 MROH7-TTC4A0A0A0MT08 1334 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 PSDA5PKW4 1024 aaPredicted RBP14.3□□□□□ -0.12
VSTM4-202ENST00000332853 CCDC93Q567U6 631 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
VSTM4-202ENST00000332853 DEPDC5O75140 1603 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 ACTN4O43707 911 aaKnown RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 CTTNQ14247 550 aaKnown RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 VSTM4Q8IW00 320 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 PLA2G12BQ9BX93 195 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 ECE2O60344 883 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 MAP3K9P80192 1104 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 POTEMA6NI47 508 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 EBAG9O00559 213 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 IQCDQ96DY2 449 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 LARSQ9P2J5 1176 aaKnown RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 TRIM49BA6NDI0 452 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 FOXN1O15353 648 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 PLA2G4BP0C869 781 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 PTPREP23469 700 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 RFX5P48382 616 aaPredicted RBP14.29□□□□□ -0.12
VSTM4-202ENST00000332853 SULF1Q8IWU6 871 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 POMGNT1Q8WZA1 660 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 GIMAP7Q8NHV1 300 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 SERPINA10Q9UK55 444 aa14.29□□□□□ -0.12
VSTM4-202ENST00000332853 GJD4Q96KN9 370 aaPredicted RBP14.28□□□□□ -0.12
VSTM4-202ENST00000332853 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 EEF1GP26641 437 aaKnown RBP14.28□□□□□ -0.12
VSTM4-202ENST00000332853 ITPK1Q13572 414 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 PPP1R21Q6ZMI0 780 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
VSTM4-202ENST00000332853 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 DDX41Q9UJV9 622 aaKnown RBP14.28□□□□□ -0.12
VSTM4-202ENST00000332853 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L15C9J2P7 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L10C9JJH3 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L13C9JLJ4 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L11C9JVI0 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L18D6R9N7 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L22D6RA61 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L17D6RBQ6 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L19D6RCP7 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L20D6RJB6 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 MYL7Q01449 175 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L24Q0WX57 530 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 ALX1Q15699 326 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 PP2D1A8MPX8 630 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 HAUS4Q9H6D7 363 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 VIMP08670 466 aaKnown RBP14.28□□□□□ -0.12
VSTM4-202ENST00000332853 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 SENP2Q9HC62 589 aa14.28□□□□□ -0.12
VSTM4-202ENST00000332853 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.12
VSTM4-202ENST00000332853 WDR19Q8NEZ3 1342 aa14.27□□□□□ -0.12
VSTM4-202ENST00000332853 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.12
VSTM4-202ENST00000332853 TCP11X2Q5H9J9 407 aa14.27□□□□□ -0.12
VSTM4-202ENST00000332853 RNF34Q969K3 372 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms