RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ENTPD3O75355 529 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 FECHP22830 423 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 PPP1R2P41236 205 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 MCM6Q14566 821 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 CNNM4Q6P4Q7 775 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 CSGALNACT2Q8N6G5 542 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 HAS1Q92839 578 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 DUSP9Q99956 384 aaKnown RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 MAGEC2Q9UBF1 373 aaPredicted RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 ARFGEF1Q9Y6D6 1849 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 MYMKA6NI61 221 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 LGALS16A8MUM7 142 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L15C9J2P7 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L13C9JLJ4 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L11C9JVI0 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L18D6R9N7 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L22D6RA61 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L17D6RBQ6 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L19D6RCP7 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L20D6RJB6 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L24Q0WX57 530 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 EZH2Q15910 746 aaKnown RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 USP17L6PQ6QN14 398 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 PRMT6Q96LA8 375 aaPredicted RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 NUP88Q99567 741 aaPredicted RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 NUDT12Q9BQG2 462 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 ABHD10Q9NUJ1 306 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.47■□□□□ 0.71
DDX28-201ENST00000332395 V9GYY5 206 aaPredicted RBP19.47■□□□□ 0.71
DDX28-201ENST00000332395 F5H6K3 240 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 KLRC3Q07444 240 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 KIAA0895Q8NCT3 520 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 GMCL1P1Q8NEA9 526 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 RAD54LQ92698 747 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 MRPL44Q9H9J2 332 aaKnown RBP19.46■□□□□ 0.71
DDX28-201ENST00000332395 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 ADGRG1Q9Y653 693 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 RNF225M0QZC1 329 aaPredicted RBP19.46■□□□□ 0.71
DDX28-201ENST00000332395 GNG11P61952 73 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 ANKRD40Q6AI12 368 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 MB21D1Q8N884 522 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 NAP1L4Q99733 375 aaKnown RBP19.46■□□□□ 0.71
DDX28-201ENST00000332395 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
DDX28-201ENST00000332395 C21orf2O43822 256 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 UNC13DQ70J99 1090 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 ZNF507Q8TCN5 953 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 HPS3Q969F9 1004 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 GJA10Q969M2 543 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 WDR24Q96S15 920 aa19.45■□□□□ 0.7
DDX28-201ENST00000332395 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
DDX28-201ENST00000332395 PVALEFA0A1B0GWK0 134 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 A0A1W2PQC6 194 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 MARCH6O60337 910 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 NDUFB10O96000 172 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 EN1Q05925 392 aaPredicted RBP19.44■□□□□ 0.7
DDX28-201ENST00000332395 GMCL1Q96IK5 515 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 CSRNP1Q96S65 589 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 SLC39A2Q9NP94 309 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 PCDHA12Q9UN75 941 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 PES1O00541 588 aaKnown RBP19.44■□□□□ 0.7
DDX28-201ENST00000332395 URI1O94763 535 aaPredicted RBP19.44■□□□□ 0.7
DDX28-201ENST00000332395 GH2P01242 217 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 JAG1P78504 1218 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
DDX28-201ENST00000332395 DYMQ7RTS9 669 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 KCNK18Q7Z418 384 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 TMTC1Q8IUR5 882 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 ANO3Q9BYT9 981 aa19.44■□□□□ 0.7
DDX28-201ENST00000332395 CGNQ9P2M7 1197 aaKnown RBP19.44■□□□□ 0.7
DDX28-201ENST00000332395 CASQ1P31415 396 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 KRT9P35527 623 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 USP11P51784 963 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 ERVK-24P63145 666 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 ELF2Q15723 593 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 FAM114A1Q8IWE2 563 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 LRRN4CLQ8ND94 238 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 EEF2KMTQ96G04 330 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 TUBGCP2Q9BSJ2 902 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 PSME4Q14997 1843 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 MEIS2O14770 477 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 RRP1BQ14684 758 aaKnown RBP19.43■□□□□ 0.7
DDX28-201ENST00000332395 ECM1Q16610 540 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 CNOT6LQ96LI5 555 aaKnown RBP19.43■□□□□ 0.7
DDX28-201ENST00000332395 AMNQ9BXJ7 453 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 LRRC27Q9C0I9 530 aa19.43■□□□□ 0.7
DDX28-201ENST00000332395 DNM2P50570 870 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 SNAP25P60880 206 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 AP3B2Q13367 1082 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 CYP26C1Q6V0L0 522 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 SEMA6BQ9H3T3 888 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 B4DLN1 442 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
DDX28-201ENST00000332395 SYDE2Q5VT97 1194 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 CENPPQ6IPU0 288 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 DDX12PQ92771 950 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
DDX28-201ENST00000332395 KCNMB3Q9NPA1 279 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms