RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 NOP2P46087 812 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 ADCY7P51828 1080 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 DPP8Q6V1X1 898 aaPredicted RBP14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 LRRC15Q8TF66 581 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 COG1Q8WTW3 980 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 SELENOOQ9BVL4 669 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 RASSF4Q9H2L5 321 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 GOLGA6AQ9NYA3 693 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 RAB21Q9UL25 225 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
HMGCS1-201ENST00000325110 MYO1CO00159 1063 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 VAV2P52735 878 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 GLIS3Q8NEA6 775 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 DNAJC7Q99615 494 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 FAM107BQ9H098 131 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 SH3GLB2Q9NR46 395 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 MYH6P13533 1939 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 MYMKA6NI61 221 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 PDE2AO00408 941 aaPredicted RBP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 EPHB6O15197 1021 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 FGFR1OPO95684 399 aaKnown RBP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 TUBBP07437 444 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 GTF2IP78347 998 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 PDE4CQ08493 712 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 C8orf74Q6P047 294 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 TRIM58Q8NG06 486 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 HNRNPLLQ8WVV9 542 aaKnown RBP14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 NUP98P52948 1817 aa14.3□□□□□ -0.12
HMGCS1-201ENST00000325110 ESYT3A0FGR9 886 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 FTCDO95954 541 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 IVLP07476 585 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 POLR2FP61218 127 aaKnown RBP14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 FAM76AQ8TAV0 307 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 DDX12PQ92771 950 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 PSMD14O00487 310 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 MYBL2P10244 700 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 RBM5P52756 815 aaKnown RBP eCLIP14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 AMPD2Q01433 879 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 VWA3BQ502W6 1294 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 LRRC1Q9BTT6 524 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 PACSIN2Q9UNF0 486 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 SLIT2O94813 1529 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 ZEB2O60315 1214 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 SCNN1DP51172 638 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 KCTD1Q719H9 257 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 KIAA0895Q8NCT3 520 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 HDAC7Q8WUI4 952 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 AK8Q96MA6 479 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 SEMA6BQ9H3T3 888 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 UBR2Q8IWV8 1755 aa14.29□□□□□ -0.12
HMGCS1-201ENST00000325110 TOGARAM1Q9Y4F4 1720 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 SLC37A4O43826 429 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 APBA1Q02410 837 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 ZNF507Q8TCN5 953 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 MS4A14Q96JA4 679 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 LSM14BQ9BX40 385 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 MED4Q9NPJ6 270 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 LRP6O75581 1613 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 TMCO5BA8MYB1 307 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 LAD1O00515 517 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 ATP1A2P50993 1020 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 CCDC170Q8IYT3 715 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 TSGA10Q9BZW7 698 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 MYH3P11055 1940 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 EIF3CLB5ME19 914 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 FGRP09769 529 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 KLHL7Q8IXQ5 586 aa14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 EIF3CQ99613 913 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-201ENST00000325110 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 TAF1P21675 1872 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 FAM196BA6NMK8 535 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 MAN2A1Q16706 1144 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 LZTS2Q9BRK4 669 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 ARHGAP20Q9P2F6 1191 aa14.27□□□□□ -0.12
HMGCS1-201ENST00000325110 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 SLC1A4P43007 532 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms