RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 GSTTP1A0A1W2PQM5 241 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 CCDC93Q567U6 631 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 NT5C3AQ9H0P0 336 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 ARMCX3Q9UH62 379 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-201ENST00000321105 NFAT5O94916 1531 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 ZBTB5O15062 677 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 DNM2P50570 870 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 XKR9Q5GH70 373 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 GALNT17Q6IS24 598 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 KLHL7Q8IXQ5 586 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 SUGCTQ9HAC7 445 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.18□□□□□ -0.46
TOP3A-201ENST00000321105 TMOD4Q9NZQ9 345 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 ZBED4O75132 1171 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SEC31AO94979 1220 aaKnown RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 DDR1Q08345 913 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 IFFO1Q0D2I5 559 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 PTPAQ15257 358 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 EHBP1Q8NDI1 1231 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 GBP3Q9H0R5 595 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 DHX36Q9H2U1 1008 aaKnown RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 H0YHG0 523 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 XRCC5P13010 732 aaKnown RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SEC23AQ15436 765 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 ZNF577Q9BSK1 485 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 LRRN2O75325 713 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 ERLIN2O94905 339 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 PLA2G4BP0C869 781 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 ATP2C1P98194 919 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SPP2Q13103 211 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 AGXT2Q9BYV1 514 aa12.17□□□□□ -0.46
TOP3A-201ENST00000321105 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-201ENST00000321105 FOXP2O15409 715 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 PDHBP11177 359 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 NEFHP12036 1026 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 RASSF7Q02833 373 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 VPS18Q9P253 973 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 FAM205AQ6ZU69 1335 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 STX10O60499 249 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 ANKRD35Q8N283 1001 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 ZNF668Q96K58 619 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-201ENST00000321105 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
TOP3A-201ENST00000321105 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 STK4Q13043 487 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 MAP9Q49MG5 647 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 NAA35Q5VZE5 725 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 ZFPM1Q8IX07 1006 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 PRMT6Q96LA8 375 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-201ENST00000321105 CCDC94Q9BW85 323 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-201ENST00000321105 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-201ENST00000321105 MYO1AQ9UBC5 1043 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 NWD1Q149M9 1564 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 K7ENM7 598 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 TMEM179Q6ZVK1 233 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 GLG1Q92896 1179 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 MON2Q7Z3U7 1717 aa12.16□□□□□ -0.46
TOP3A-201ENST00000321105 TLDC2A0PJX2 215 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 PKN1Q16512 942 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 ASIC2Q16515 512 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 TMC4Q7Z404 712 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
TOP3A-201ENST00000321105 CEP104O60308 925 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 NDUFB10O96000 172 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 GADL1Q6ZQY3 521 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 CCDC25Q86WR0 208 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 FNBP1Q96RU3 617 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 EMILIN3Q9NT22 766 aa12.15□□□□□ -0.46
TOP3A-201ENST00000321105 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.47
TOP3A-201ENST00000321105 ECE1P42892 770 aa12.15□□□□□ -0.47
TOP3A-201ENST00000321105 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.47
TOP3A-201ENST00000321105 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.47
TOP3A-201ENST00000321105 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.47
TOP3A-201ENST00000321105 U2AF1L4Q8WU68 220 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms