RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 GPATCH4Q5T3I0 446 aaKnown RBP23.06■■□□□ 1.28
TTC39C-202ENST00000317571 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
TTC39C-202ENST00000317571 RSRC2Q7L4I2 434 aaKnown RBP23.06■■□□□ 1.28
TTC39C-202ENST00000317571 PODNQ7Z5L7 613 aa23.06■■□□□ 1.28
TTC39C-202ENST00000317571 GLIS3Q8NEA6 775 aa23.06■■□□□ 1.28
TTC39C-202ENST00000317571 UIMC1Q96RL1 719 aa23.06■■□□□ 1.28
TTC39C-202ENST00000317571 DNAJC7Q99615 494 aa23.06■■□□□ 1.28
TTC39C-202ENST00000317571 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
TTC39C-202ENST00000317571 EEF2P13639 858 aaKnown RBP23.05■■□□□ 1.28
TTC39C-202ENST00000317571 TMEM119Q4V9L6 283 aa23.05■■□□□ 1.28
TTC39C-202ENST00000317571 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
TTC39C-202ENST00000317571 SV2BQ7L1I2 683 aa23.05■■□□□ 1.28
TTC39C-202ENST00000317571 SNX29Q8TEQ0 813 aa23.05■■□□□ 1.28
TTC39C-202ENST00000317571 PLSCR1O15162 318 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 COBLL1Q53SF7 1204 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 ZNF569Q5MCW4 686 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 SLC35F6Q8N357 371 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 RAD54LQ92698 747 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 CUL5Q93034 780 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 AGPAT5Q9NUQ2 364 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 ZNF219Q9P2Y4 722 aaPredicted RBP23.04■■□□□ 1.28
TTC39C-202ENST00000317571 STK17AQ9UEE5 414 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 CAPN11Q9UMQ6 739 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L15C9J2P7 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L13C9JLJ4 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L11C9JVI0 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L18D6R9N7 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L22D6RA61 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L17D6RBQ6 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L19D6RCP7 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L20D6RJB6 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 APBA3O96018 575 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 AMPD3Q01432 767 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L24Q0WX57 530 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 QRICH1Q2TAL8 776 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 USP17L6PQ6QN14 398 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 NOC3LQ8WTT2 800 aaKnown RBP23.04■■□□□ 1.28
TTC39C-202ENST00000317571 P2RX7Q99572 595 aaKnown RBP23.04■■□□□ 1.28
TTC39C-202ENST00000317571 TRIM10Q9UDY6 481 aa23.04■■□□□ 1.28
TTC39C-202ENST00000317571 DDX25Q9UHL0 483 aaKnown RBP23.04■■□□□ 1.28
TTC39C-202ENST00000317571 PDIA5Q14554 519 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 CENPPQ6IPU0 288 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 UNC13DQ70J99 1090 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 MAGEC2Q9UBF1 373 aaPredicted RBP23.03■■□□□ 1.28
TTC39C-202ENST00000317571 ECE2O60344 883 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 DNM2P50570 870 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 TMEM266Q2M3C6 531 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 CNNM4Q6P4Q7 775 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 PSTPIP2Q9H939 334 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 TFR2Q9UP52 801 aa23.03■■□□□ 1.28
TTC39C-202ENST00000317571 BICDL2A1A5D9 508 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 KIF5CO60282 957 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 JAG1P78504 1218 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 EHHADHQ08426 723 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 OR8K1Q8NGG5 319 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 RAD21O60216 631 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 NDUFA10O95299 355 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 SEPT2Q15019 361 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 CCDC47Q96A33 483 aaKnown RBP23.02■■□□□ 1.28
TTC39C-202ENST00000317571 CCDC17Q96LX7 622 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 IDI2Q9BXS1 227 aa23.02■■□□□ 1.28
TTC39C-202ENST00000317571 LUC7L2Q9Y383 392 aaKnown RBP23.02■■□□□ 1.28
TTC39C-202ENST00000317571 EPN1Q9Y6I3 576 aaPredicted RBP23.02■■□□□ 1.28
TTC39C-202ENST00000317571 STRIP1Q5VSL9 837 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 ZSCAN29Q8IWY8 852 aaPredicted RBP23.01■■□□□ 1.27
TTC39C-202ENST00000317571 MKL1Q969V6 931 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 FHOD1Q9Y613 1164 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 TAL1P17542 331 aaPredicted RBP23.01■■□□□ 1.27
TTC39C-202ENST00000317571 SNAP25P60880 206 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 HERVK_113P62684 666 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 TEX35Q5T0J7 233 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 KRT222Q8N1A0 295 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 DDX12PQ92771 950 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 CDK5RAP3Q96JB5 506 aa23.01■■□□□ 1.27
TTC39C-202ENST00000317571 PVALEFA0A1B0GWK0 134 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 ZRANB2O95218 330 aaKnown RBP eCLIP23■■□□□ 1.27
TTC39C-202ENST00000317571 CHRNA5P30532 468 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 RBM5P52756 815 aaKnown RBP eCLIP23■■□□□ 1.27
TTC39C-202ENST00000317571 MRPL12P52815 198 aaKnown RBP23■■□□□ 1.27
TTC39C-202ENST00000317571 TBC1D8BQ0IIM8 1120 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 CERKLQ49MI3 558 aaPredicted RBP23■■□□□ 1.27
TTC39C-202ENST00000317571 KRT79Q5XKE5 535 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 ZSWIM4Q9H7M6 989 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 GDF11O95390 407 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 CDC37Q16543 378 aaPredicted RBP23■■□□□ 1.27
TTC39C-202ENST00000317571 SLFN13Q68D06 897 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 TATDN1Q6P1N9 297 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 NYAP2Q9P242 653 aa23■■□□□ 1.27
TTC39C-202ENST00000317571 SEC31AO94979 1220 aaKnown RBP22.99■■□□□ 1.27
TTC39C-202ENST00000317571 SLC1A4P43007 532 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 MTIF2P46199 727 aaKnown RBP22.99■■□□□ 1.27
TTC39C-202ENST00000317571 LRRC41Q15345 812 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 MEA1Q16626 185 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 DNAJC19Q96DA6 116 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 NOC4LQ9BVI4 516 aaKnown RBP22.99■■□□□ 1.27
TTC39C-202ENST00000317571 PI4KBQ9UBF8 816 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
TTC39C-202ENST00000317571 MRIQ9BWK5 157 aa22.99■■□□□ 1.27
TTC39C-202ENST00000317571 FGFBP2Q9BYJ0 223 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms