RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 DNAJC8O75937 253 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-201ENST00000316707 GNA14O95837 355 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 STAMQ92783 540 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 IFT74Q96LB3 600 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 NAP1L3Q99457 506 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-201ENST00000316707 LZTS2Q9BRK4 669 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 LRP2BPQ9P2M1 347 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 SLC12A6Q9UHW9 1150 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 CAPN6Q9Y6Q1 641 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PCDH11XQ9BZA7 1347 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PCDH11YQ9BZA8 1340 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 RBAK-RBAKDNI3L0D1 243 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PPP2R2AP63151 447 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 GUCY1A3Q02108 690 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PSMD2Q13200 908 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PKN1Q16512 942 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 CENPPQ6IPU0 288 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 TYW1BQ6NUM6 668 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 KRT25Q7Z3Z0 450 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 TATDN2Q93075 761 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 C7orf25Q9BPX7 421 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 TRIM9Q9C026 710 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 MMRN2Q9H8L6 949 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 RBM12Q9NTZ6 932 aaKnown RBP5.27□□□□□ -1.57
PTPN13-201ENST00000316707 TRIM10Q9UDY6 481 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 PCDHGC5Q9Y5F6 944 aa5.27□□□□□ -1.57
PTPN13-201ENST00000316707 TCRBV5S4A2TA0A5A2 114 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF233A6NK53 670 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 MGRN1O60291 552 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 LUC7L3O95232 432 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PFKFB3Q16875 520 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PDXDC1Q6P996 788 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 DGKHQ86XP1 1220 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 GSPT2Q8IYD1 628 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 TSEN2Q8NCE0 465 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CHMP6Q96FZ7 201 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 INPP4AQ96PE3 977 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KDM4CQ9H3R0 1056 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SPATS2LQ9NUQ6 558 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SART1O43290 800 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SFMBT2Q5VUG0 894 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KRT28Q7Z3Y7 464 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 DAGLBQ8NCG7 672 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ARMT1Q9H993 441 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 AXIN2Q9Y2T1 843 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PGRMC1O00264 195 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PDE8AO60658 829 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 TRHP20396 242 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 MCM7P33993 719 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CCDC38Q502W7 563 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 NFRKBQ6P4R8 1299 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 EHD4Q9H223 541 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 AGPAT5Q9NUQ2 364 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CEP72Q9P209 647 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ARHGAP20Q9P2F6 1191 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ATP8B3O60423 1300 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ORC4O43929 436 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KRT14P02533 472 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 HSPA6P17066 643 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CASP1P29466 404 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PHKA1P46020 1223 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CARSP49589 748 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF131P52739 623 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ICA1Q05084 483 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 ITGB3BPQ13352 177 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KRT71Q3SY84 523 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 DZIP3Q86Y13 1208 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SYCE1Q8N0S2 351 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SH2D3CQ8N5H7 860 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 MAGEB6Q8N7X4 407 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 USP38Q8NB14 1042 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 HDAC7Q8WUI4 952 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PGM2Q96G03 612 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PLAAQ9Y263 795 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SPEF2Q9C093 1822 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 BTNL10A8MVZ5 291 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KLRC4O43908 158 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SEC24CP53992 1094 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 RRAGAQ7L523 313 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CCDC63Q8NA47 563 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 TCP11Q8WWU5 503 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 FAM89AQ96GI7 184 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 CEP63Q96MT8 703 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 NOP53Q9NZM5 478 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 DIS3Q9Y2L1 958 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 SERPING1P05155 500 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 FKBP3Q00688 224 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 NKX1-1Q15270 411 aaPredicted RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 KRT26Q7Z3Y9 468 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 RAB17Q9H0T7 212 aa5.26□□□□□ -1.57
PTPN13-201ENST00000316707 PPANQ9NQ55 473 aaKnown RBP5.26□□□□□ -1.57
PTPN13-201ENST00000316707 FAM205CA6NFA0 338 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TRIM37O94972 964 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 FGRP09769 529 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 FGFR2P21802 821 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 GNA11P29992 359 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 HPDP32754 393 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 PPP2R5AQ15172 486 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 EZH2Q15910 746 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms