RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 IDEP14735 1019 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 STAT3P40763 770 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 CLK2P49760 499 aaKnown RBP13.93□□□□□ -0.18
RNF4-201ENST00000314289 TBX2Q13207 712 aaPredicted RBP13.93□□□□□ -0.18
RNF4-201ENST00000314289 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 TMEM139Q8IV31 216 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 MKL1Q969V6 931 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 GLIS2Q9BZE0 524 aaPredicted RBP13.93□□□□□ -0.18
RNF4-201ENST00000314289 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 EGFRP00533 1210 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 KCNJ12Q14500 433 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 TRIM47Q96LD4 638 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 AK8Q96MA6 479 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 SRRTQ9BXP5 876 aaKnown RBP13.92□□□□□ -0.18
RNF4-201ENST00000314289 BLOC1S4Q9NUP1 217 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 hCG_1984214I3L0E3 225 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 NRDCO43847 1150 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 CASP14P31944 242 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
RNF4-201ENST00000314289 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 ZNF713Q8N859 430 aaPredicted RBP13.92□□□□□ -0.18
RNF4-201ENST00000314289 GLIS3Q8NEA6 775 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 MYMKA6NI61 221 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 SOWAHDA6NJG2 315 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 RNF225M0QZC1 329 aaPredicted RBP13.92□□□□□ -0.18
RNF4-201ENST00000314289 ENTPD3O75355 529 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 BMP3P12645 472 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 CCDC174Q6PII3 467 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 FCHSD1Q86WN1 690 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 IRF2BP1Q8IU81 584 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 RTKN2Q8IZC4 609 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
RNF4-201ENST00000314289 A0A0U1RQJ8 604 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 MEIS2O14770 477 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 MYO1BO43795 1136 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 UBXN2AP68543 259 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 TCP11X2Q5H9J9 407 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 DCAF4Q8WV16 495 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 ATRIPQ8WXE1 791 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 ZNF646O15015 1829 aaPredicted RBP13.91□□□□□ -0.18
RNF4-201ENST00000314289 GREB1LQ9C091 1923 aaPredicted RBP13.91□□□□□ -0.18
RNF4-201ENST00000314289 VIL1P09327 827 aaKnown RBP13.91□□□□□ -0.18
RNF4-201ENST00000314289 FXR1P51114 621 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNF4-201ENST00000314289 CXCL9Q07325 125 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 DGKZQ13574 1117 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 LRRC41Q15345 812 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 PRR16Q569H4 304 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 POLD4Q9HCU8 107 aa13.91□□□□□ -0.18
RNF4-201ENST00000314289 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 COPB1P53618 953 aaKnown RBP13.9□□□□□ -0.18
RNF4-201ENST00000314289 TERF2Q15554 542 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 FILIP1LQ4L180 1135 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 KRT79Q5XKE5 535 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 GIMAP8Q8ND71 665 aaPredicted RBP13.9□□□□□ -0.18
RNF4-201ENST00000314289 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 GMLQ99445 158 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 TBC1D7Q9P0N9 293 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 SV2BQ7L1I2 683 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
RNF4-201ENST00000314289 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 HDAC9Q9UKV0 1011 aa13.9□□□□□ -0.18
RNF4-201ENST00000314289 CNTNAP1P78357 1384 aa13.9□□□□□ -0.19
RNF4-201ENST00000314289 E9PMD0 336 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PSMA7O14818 248 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 SLU7O95391 586 aaKnown RBP13.89□□□□□ -0.19
RNF4-201ENST00000314289 GYPCP04921 128 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 UBXN1Q04323 297 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 KIAA0895Q8NCT3 520 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 FBXO28Q9NVF7 368 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 DNAI1Q9UI46 699 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 C10orf71Q711Q0 1435 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 AKR1B15C9JRZ8 316 aaPredicted RBP13.89□□□□□ -0.19
RNF4-201ENST00000314289 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
RNF4-201ENST00000314289 CSGALNACT2Q8N6G5 542 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PCNTO95613 3336 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 ATRNL1Q5VV63 1379 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 POTECB2RU33 542 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PSMD1Q99460 953 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 IRX2Q9BZI1 471 aaPredicted RBP13.89□□□□□ -0.19
RNF4-201ENST00000314289 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms