RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CAPS2Q9BXY5 557 aa15.37■□□□□ 0.05
MKS1-201ENST00000313863 YY1AP1Q9H869 796 aa15.37■□□□□ 0.05
MKS1-201ENST00000313863 TSPY3P0CV98 308 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 TSPY8P0CW00 308 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 MYBL2P10244 700 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 NOP2P46087 812 aaKnown RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 IRAK1P51617 712 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 NAPAP54920 295 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 ERFEQ4G0M1 354 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 NEK8Q86SG6 692 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 TSG101Q99816 390 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 SIK3Q9Y2K2 1263 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 DUSP10Q9Y6W6 482 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 SSU72P8A0A1W2PR75 194 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 CCNT1O60563 726 aaKnown RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 SMARCA1P28370 1054 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 MAGEA1P43355 309 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 GSTO1P78417 241 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 GUF1Q8N442 669 aaKnown RBP15.36■□□□□ 0.05
MKS1-201ENST00000313863 NOX5Q96PH1 765 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 LRRC1Q9BTT6 524 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 ARHGAP20Q9P2F6 1191 aa15.36■□□□□ 0.05
MKS1-201ENST00000313863 ZNF263O14978 683 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 PSMD2Q13200 908 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 TMEM266Q2M3C6 531 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 LETM2Q2VYF4 491 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 CFAP221Q4G0U5 840 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 SLC10A5Q5PT55 438 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 C8orf74Q6P047 294 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 CERS3Q8IU89 383 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 IFT20Q8IY31 132 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 GSPT2Q8IYD1 628 aaKnown RBP15.35■□□□□ 0.05
MKS1-201ENST00000313863 RIN2Q8WYP3 895 aaPredicted RBP15.35■□□□□ 0.05
MKS1-201ENST00000313863 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
MKS1-201ENST00000313863 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 CAPN6Q9Y6Q1 641 aa15.35■□□□□ 0.05
MKS1-201ENST00000313863 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 MOCS3O95396 460 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 TADA2BQ86TJ2 420 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 SPATS2Q86XZ4 545 aaKnown RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 PROM2Q8N271 834 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 ZBTB9Q96C00 473 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 SEMA6BQ9H3T3 888 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 RIC8AQ9NPQ8 531 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 SEC63Q9UGP8 760 aaKnown RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 EIF3HO15372 352 aaKnown RBP eCLIP15.34■□□□□ 0.05
MKS1-201ENST00000313863 BAG3O95817 575 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 FCER1AP12319 257 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 SKOR1P84550 965 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 EVX2Q03828 476 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 CACNA2D4Q7Z3S7 1137 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 KIAA0895Q8NCT3 520 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 SYN2Q92777 582 aaPredicted RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 MLXIPQ9HAP2 919 aa15.34■□□□□ 0.05
MKS1-201ENST00000313863 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
MKS1-201ENST00000313863 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 KLRF2D3W0D1 207 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 PRDX5P30044 214 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 ICE2Q659A1 982 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 PDXDC1Q6P996 788 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 RRAGAQ7L523 313 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 LRRC15Q8TF66 581 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
MKS1-201ENST00000313863 ATXN2Q99700 1313 aaKnown RBP15.33■□□□□ 0.04
MKS1-201ENST00000313863 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 GRID2IPA4D2P6 1211 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 CYTH3O43739 400 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 PLEKP08567 350 aaPredicted RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 TECP42680 631 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 GNGT1P63211 74 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 PAK2Q13177 524 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 ITPK1Q13572 414 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 SEPT2Q15019 361 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 B4GALNT4Q76KP1 1039 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 SLC39A2Q9NP94 309 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 DMGDHQ9UI17 866 aaKnown RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 A0A0G2JS52 829 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms