RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 KCNA3P22001 575 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 DGKZQ13574 1117 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 AK8Q96MA6 479 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
SMG8-201ENST00000300917 E9PMD0 336 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 EGFRP00533 1210 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 STIM1Q13586 685 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 SYDE2Q5VT97 1194 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
SMG8-201ENST00000300917 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
SMG8-201ENST00000300917 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 MYH8P13535 1937 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 CFBP00751 764 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
SMG8-201ENST00000300917 PPP2R2CQ9Y2T4 447 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 NIM1KQ8IY84 436 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 ANKRD20A12PQ8NF67 263 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
SMG8-201ENST00000300917 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 POTEB3A0JP26 581 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 POTECB2RU33 542 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 POTEBQ6S5H4 581 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 LRRN4CLQ8ND94 238 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 DCAF4Q8WV16 495 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
SMG8-201ENST00000300917 B4DLN1 442 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 MEIS2O14770 477 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 MYO1BO43795 1136 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 GYPCP04921 128 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 KLK7P49862 253 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 CXCL9Q07325 125 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
SMG8-201ENST00000300917 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
SMG8-201ENST00000300917 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 ENTPD3O75355 529 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 RHOBTB3O94955 611 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
SMG8-201ENST00000300917 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
SMG8-201ENST00000300917 KIAA0895Q8NCT3 520 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 MKL1Q969V6 931 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
SMG8-201ENST00000300917 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 DDX12PQ92771 950 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
SMG8-201ENST00000300917 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 ZNF76P36508 570 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 RAD9BQ6WBX8 426 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
SMG8-201ENST00000300917 REXO1L1PQ8IX06 675 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 URI1O94763 535 aaPredicted RBP16.3■□□□□ 0.2
SMG8-201ENST00000300917 GNG11P61952 73 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
SMG8-201ENST00000300917 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
SMG8-201ENST00000300917 COL4A5P29400 1685 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 CHMP2AO43633 222 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 MTIF2P46199 727 aaKnown RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 AMPD3Q01432 767 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 POTEGQ6S5H5 508 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 DUSP9Q99956 384 aaKnown RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 FANCGO15287 622 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 ACRBPQ8NEB7 543 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 MRPL44Q9H9J2 332 aaKnown RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 PKD2L1Q9P0L9 805 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
SMG8-201ENST00000300917 KRT9P35527 623 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMG8-201ENST00000300917 KCNB1Q14721 858 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 RAD54LQ92698 747 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 P2RX5Q93086 422 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 FEZ1Q99689 392 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms