RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TRIM10Q9UDY6 481 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 ECE2O60344 883 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 PPP1R11O60927 126 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 GUCY2CP25092 1073 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 STAT3P40763 770 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 H0YIN7 160 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 H2AFXP16104 143 aaPredicted RBP11.27□□□□□ -0.6
FOXN4-201ENST00000299162 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.6
FOXN4-201ENST00000299162 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.6
FOXN4-201ENST00000299162 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 PSTPIP2Q9H939 334 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 SH3GLB2Q9NR46 395 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 RMND1Q9NWS8 449 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 GUCA1BQ9UMX6 200 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 PCDHA1Q9Y5I3 950 aa11.27□□□□□ -0.6
FOXN4-201ENST00000299162 MEIS1O00470 390 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 CCDC175P0C221 793 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 RHOXF2BP0C7M4 288 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 ALDH1B1P30837 517 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
FOXN4-201ENST00000299162 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 GDAP1L1Q96MZ0 367 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 RHOXF2Q9BQY4 288 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 M0R2N6 131 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 PDE6BP35913 854 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
FOXN4-201ENST00000299162 RRP15Q9Y3B9 282 aaKnown RBP11.27□□□□□ -0.61
FOXN4-201ENST00000299162 CCDC88AQ3V6T2 1871 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 GAKO14976 1311 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 STX10O60499 249 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 MFAP3LO75121 409 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 SLFN13Q68D06 897 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 MASTLQ96GX5 879 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 CTAGE1Q96RT6 745 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 DNAJC18Q9H819 358 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 FAM207AQ9NSI2 230 aaPredicted RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 RWDD2AQ9UIY3 292 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 KIF2AO00139 706 aaPredicted RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ENC1O14682 589 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 GH2P01242 217 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ICA1Q05084 483 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 TMEM266Q2M3C6 531 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 CCDC47Q96A33 483 aaKnown RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 TRIM9Q9C026 710 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 DDX25Q9UHL0 483 aaKnown RBP11.26□□□□□ -0.61
FOXN4-201ENST00000299162 ADAM21Q9UKJ8 722 aa11.26□□□□□ -0.61
FOXN4-201ENST00000299162 TTC26A0AVF1 554 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 TBC1D8BQ0IIM8 1120 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 SV2BQ7L1I2 683 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 AGPAT5Q9NUQ2 364 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 RREB1Q92766 1687 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 MYMKA6NI61 221 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 N4BP1O75113 896 aaKnown RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 DNA2P51530 1060 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 SATB1Q01826 763 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 PRR16Q569H4 304 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 KRT79Q5XKE5 535 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 MMTAG2Q9BU76 263 aaKnown RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 PKD2L1Q9P0L9 805 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 E9PMD0 336 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CHMP2AO43633 222 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 ERVK-24P63145 666 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CYP27A1Q02318 531 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 PPP2R3AQ06190 1150 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 IRF2BP1Q8IU81 584 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 PRMT6Q96LA8 375 aaPredicted RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CNOT6LQ96LI5 555 aaKnown RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CSRNP1Q96S65 589 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms