RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ELF1P32519 619 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 MST1RQ04912 1400 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 MEA1Q16626 185 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TSG101Q99816 390 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 HAUS2Q9NVX0 235 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 ASAP1Q9ULH1 1129 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TRAF5O00463 557 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 CLGNO14967 610 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TXKP42681 527 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 LRRC41Q15345 812 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TRADDQ15628 312 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TMEM60Q9H2L4 133 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
TRUB1-201ENST00000298746 MEGF6O75095 1541 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
TRUB1-201ENST00000298746 PDHBP11177 359 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 GYG1P46976 350 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
TRUB1-201ENST00000298746 UIMC1Q96RL1 719 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
TRUB1-201ENST00000298746 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.39
TRUB1-201ENST00000298746 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.39
TRUB1-201ENST00000298746 A0A1B0GUA9 196 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 CLTAP09496 248 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 SKOR1P84550 965 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 CCDC155Q8N6L0 562 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 MTMR8Q96EF0 704 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 HGSO14964 777 aaPredicted RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 VWA3BQ502W6 1294 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 ARL6IP4Q66PJ3 421 aaKnown RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 HIBCHQ6NVY1 386 aaPredicted RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 GIMAP8Q8ND71 665 aaPredicted RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 TCP11Q8WWU5 503 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 CYFIP2Q96F07 1278 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 DPH5Q9H2P9 285 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 PLAGL2Q9UPG8 496 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 GMNCA6NCL1 334 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 EPHB6O15197 1021 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 FAM107AO95990 144 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 TROAPQ12815 778 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 SEC23AQ15436 765 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 SFMBT2Q5VUG0 894 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 LRRC45Q96CN5 670 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
TRUB1-201ENST00000298746 GOLPH3Q9H4A6 298 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 DONSONQ9NYP3 566 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
TRUB1-201ENST00000298746 NFAT5O94916 1531 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 BUB1BO60566 1050 aaPredicted RBP12.57□□□□□ -0.4
TRUB1-201ENST00000298746 FSBPO95073 299 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 NAPAP54920 295 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 SV2BQ7L1I2 683 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 PARP9Q8IXQ6 854 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 RHOBTB3O94955 611 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 TXNRD1Q16881 649 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
TRUB1-201ENST00000298746 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
TRUB1-201ENST00000298746 CASKIN2Q8WXE0 1202 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
TRUB1-201ENST00000298746 KRT18P05783 430 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 PHF20L1A8MW92 1017 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 RAD51CO43502 376 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 DDAH1O94760 285 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 SMTNP53814 917 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 KCNB1Q14721 858 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 MAN2A1Q16706 1144 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 ADAT2Q7Z6V5 191 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms