RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 TRIM10Q9UDY6 481 aa18.19■□□□□ 0.5
CACFD1-201ENST00000291722 SIPA1L1O43166 1804 aa18.19■□□□□ 0.5
CACFD1-201ENST00000291722 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 ERCC3P19447 782 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 PPP2R3AQ06190 1150 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 STIM1Q13586 685 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 ZNF569Q5MCW4 686 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 TPM1P09493 284 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 NOP2P46087 812 aaKnown RBP18.18■□□□□ 0.5
CACFD1-201ENST00000291722 CALML4Q96GE6 196 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 THAP9Q9H5L6 903 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 SUGT1Q9Y2Z0 365 aa18.18■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L15C9J2P7 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L13C9JLJ4 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L11C9JVI0 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L18D6R9N7 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L22D6RA61 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L17D6RBQ6 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L19D6RCP7 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L20D6RJB6 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 MYL1P05976 194 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 CCNE1P24864 410 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 RBM5P52756 815 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L24Q0WX57 530 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 USP17L6PQ6QN14 398 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 TUBGCP2Q9BSJ2 902 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 CUEDC2Q9H467 287 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 RIC8AQ9NPQ8 531 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 SWAP70Q9UH65 585 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 REXO2Q9Y3B8 237 aaKnown RBP18.17■□□□□ 0.5
CACFD1-201ENST00000291722 APBA3O96018 575 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 ARHGAP25P42331 645 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 TEX35Q5T0J7 233 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 HHIPL2Q6UWX4 724 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 SLC35F6Q8N357 371 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 CCDC51Q96ER9 411 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 CNOT6LQ96LI5 555 aaKnown RBP18.17■□□□□ 0.5
CACFD1-201ENST00000291722 AGPAT5Q9NUQ2 364 aa18.17■□□□□ 0.5
CACFD1-201ENST00000291722 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
CACFD1-201ENST00000291722 SEC31AO94979 1220 aaKnown RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 EEF1GP26641 437 aaKnown RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 ALDH1B1P30837 517 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 TMTC1Q8IUR5 882 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 GPIHBP1Q8IV16 184 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 SNX29Q8TEQ0 813 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 HAS1Q92839 578 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 DHTKD1Q96HY7 919 aaPredicted RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 FAM198AQ9UFP1 575 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 HLA-DOAP06340 250 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 EEF2P13639 858 aaKnown RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 WDR59Q6PJI9 974 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 CYP26C1Q6V0L0 522 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 SV2BQ7L1I2 683 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 MASTLQ96GX5 879 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 MAGEC2Q9UBF1 373 aaPredicted RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 CLGNO14967 610 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 LRRC41Q15345 812 aa18.16■□□□□ 0.5
CACFD1-201ENST00000291722 LARP4BQ92615 738 aaKnown RBP18.16■□□□□ 0.5
CACFD1-201ENST00000291722 EFCAB8A8MWE9 144 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 hCG_1984214I3L0E3 225 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 ZBTB5O15062 677 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 GDF11O95390 407 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
CACFD1-201ENST00000291722 ZNF713Q8N859 430 aaPredicted RBP18.15■□□□□ 0.5
CACFD1-201ENST00000291722 RASSF4Q9H2L5 321 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 PUF60Q9UHX1 559 aaKnown RBP18.15■□□□□ 0.5
CACFD1-201ENST00000291722 KCNG1Q9UIX4 513 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 KIF5CO60282 957 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 IDEP14735 1019 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 CHRNA5P30532 468 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 PDE6BP35913 854 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 MIIPQ5JXC2 388 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 CDK5RAP3Q96JB5 506 aa18.15■□□□□ 0.5
CACFD1-201ENST00000291722 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
CACFD1-201ENST00000291722 SLX4Q8IY92 1834 aa18.14■□□□□ 0.5
CACFD1-201ENST00000291722 MTIF2P46199 727 aaKnown RBP18.14■□□□□ 0.49
CACFD1-201ENST00000291722 JAG1P78504 1218 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 SEPT2Q15019 361 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 QRICH1Q2TAL8 776 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 SIAH1Q8IUQ4 282 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 GTF2A1P52655 376 aaPredicted RBP18.14■□□□□ 0.49
CACFD1-201ENST00000291722 TRIM14Q14142 442 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 TMEM266Q2M3C6 531 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 C2CD5Q86YS7 1000 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 RAD54LQ92698 747 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 CUL5Q93034 780 aa18.14■□□□□ 0.49
CACFD1-201ENST00000291722 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
CACFD1-201ENST00000291722 LUC7L2Q9Y383 392 aaKnown RBP18.14■□□□□ 0.49
CACFD1-201ENST00000291722 ECE2O60344 883 aa18.13■□□□□ 0.49
CACFD1-201ENST00000291722 TBC1D8BQ0IIM8 1120 aa18.13■□□□□ 0.49
CACFD1-201ENST00000291722 RSRC2Q7L4I2 434 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms