RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SLC1A4P43007 532 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 GRIK3Q13003 919 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CDC37Q16543 378 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 ARMT1Q9H993 441 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 FECHP22830 423 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 PDE4DQ08499 809 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 MBD4O95243 580 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 MMEP08473 750 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 SLCO1A2P46721 670 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 POLE2P56282 527 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 PDIA6Q15084 440 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 MTMR8Q96EF0 704 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 NUCKS1Q9H1E3 243 aaKnown RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
PTPRR-201ENST00000283228 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 TLDC1Q6P9B6 456 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 DDX47Q9H0S4 455 aaKnown RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 C3P01024 1663 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 LRRC10BA6NIK2 292 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 GNAT1P11488 350 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 KCNJ2P63252 427 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 HPS3Q969F9 1004 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 KLHL33A6NCF5 533 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 A8MUI8 341 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 ATP11AP98196 1134 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 MLXIPLQ9NP71 852 aa12.53□□□□□ -0.4
PTPRR-201ENST00000283228 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
PTPRR-201ENST00000283228 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.4
PTPRR-201ENST00000283228 XRCC4Q13426 336 aa12.52□□□□□ -0.4
PTPRR-201ENST00000283228 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.4
PTPRR-201ENST00000283228 RAPGEF4Q8WZA2 1011 aa12.52□□□□□ -0.4
PTPRR-201ENST00000283228 ARHGAP20Q9P2F6 1191 aa12.52□□□□□ -0.4
PTPRR-201ENST00000283228 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.4
PTPRR-201ENST00000283228 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.4
PTPRR-201ENST00000283228 CEMIPQ8WUJ3 1361 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 A0A1W2PQC6 194 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 DAPK3O43293 454 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 SRGNP10124 158 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 ZNF844Q08AG5 666 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 HLFQ16534 295 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 PIK3R5Q8WYR1 880 aa12.52□□□□□ -0.41
PTPRR-201ENST00000283228 LRRD1A4D1F6 860 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 H0Y3Z8 333 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 PRKAB2O43741 272 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 MGRN1O60291 552 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 PSMD1Q99460 953 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
PTPRR-201ENST00000283228 IGF2BP3O00425 579 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPRR-201ENST00000283228 BMP15O95972 392 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 SESN3P58005 492 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 RPS6KA1Q15418 735 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 KIAA0753Q2KHM9 967 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 MAGEB6Q8N7X4 407 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 IP6K1Q92551 441 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 TATDN2Q93075 761 aa12.51□□□□□ -0.41
PTPRR-201ENST00000283228 XPO6Q96QU8 1125 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms