RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 AP5M1Q9H0R1 490 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 MRPL11Q9Y3B7 192 aaKnown RBP16.77■□□□□ 0.28
HMGN3-201ENST00000275036 Q9Y3F1 56 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 CDH23Q9H251 3354 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 DCDC2CA8MYV0 355 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 CD4P01730 458 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 RAG1P15918 1043 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 PDE4DQ08499 809 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 DEFB123Q8N688 67 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 MAF1Q9H063 256 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
HMGN3-201ENST00000275036 DDAH1O94760 285 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 NEFLP07196 543 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 RXRAP19793 462 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 HSD17B4P51659 736 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 GHRHRQ02643 423 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
HMGN3-201ENST00000275036 UMODL1Q5DID0 1318 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 CFBP00751 764 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 TIMP1P01033 207 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 LIFRP42702 1097 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 FPGSQ05932 587 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 PIBF1Q8WXW3 757 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 MTMR10Q9NXD2 777 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 SCN10AQ9Y5Y9 1956 aa16.74■□□□□ 0.27
HMGN3-201ENST00000275036 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 CABYRO75952 493 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 PURAQ00577 322 aaKnown RBP16.73■□□□□ 0.27
HMGN3-201ENST00000275036 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
HMGN3-201ENST00000275036 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
HMGN3-201ENST00000275036 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
HMGN3-201ENST00000275036 PPP1R13LQ8WUF5 828 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 NEK1Q96PY6 1258 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 TRPV6Q9H1D0 765 aa16.73■□□□□ 0.27
HMGN3-201ENST00000275036 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 B4GALT4O60513 344 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 CCDC62Q6P9F0 684 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
HMGN3-201ENST00000275036 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.271e-12■■□□□ 13.1
HMGN3-201ENST00000275036 PXMP2Q9NR77 195 aa16.72■□□□□ 0.27
HMGN3-201ENST00000275036 DOCK5Q9H7D0 1870 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 ZEB2O60315 1214 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 MYL3P08590 195 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 CSF2RAP15509 400 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 KIF5BP33176 963 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 CYP2C18P33260 490 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 LY6KQ17RY6 165 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 KCNB2Q92953 911 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 GUCD1Q96NT3 240 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
HMGN3-201ENST00000275036 A6NJR5 290 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 B4DLN1 442 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 TLR3O15455 904 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 RGS20O76081 388 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 NR3C2P08235 984 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 CPT1AP50416 773 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 FAM109BQ6ICB4 259 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 IL31RAQ8NI17 732 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 VWCEQ96DN2 955 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 FAM161BQ96MY7 647 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms