RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 VGLL2Q8N8G2 317 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 WDR66Q8TBY9 1149 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 PTPN22Q9Y2R2 807 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 GLB1P16278 677 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 VGLL4Q14135 290 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 DCAF15Q66K64 600 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 Q6ZS46 218 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 LPIN2Q92539 896 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 POP1Q99575 1024 aaKnown RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 TMEM39BQ9GZU3 492 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 POLIQ9UNA4 740 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 AOX1Q06278 1338 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CCL15-CCL14A0A0B4J2E2 113 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 FSCN2O14926 492 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 WISP1O95388 367 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CETPP11597 493 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 SLC5A1P13866 664 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 AAMPQ13685 434 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
LRTM1-201ENST00000273286 CCL15Q16663 113 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 LRRC24Q50LG9 513 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 ARMC5Q96C12 935 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 PTPN18Q99952 460 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 USP44Q9H0E7 712 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 ZFP64Q9NPA5 681 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
LRTM1-201ENST00000273286 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.49
LRTM1-201ENST00000273286 EYA2O00167 538 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 FGFR2P21802 821 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 ACAD11Q709F0 780 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 CD99L2Q8TCZ2 262 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 KCNK4Q9NYG8 393 aa12.02□□□□□ -0.49
LRTM1-201ENST00000273286 KIAA0100Q14667 2235 aaKnown RBP12.01□□□□□ -0.49
LRTM1-201ENST00000273286 KIF22Q14807 665 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 ADAM19Q9H013 955 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 CHRDQ9H2X0 955 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
LRTM1-201ENST00000273286 HTTP42858 3142 aa12.01□□□□□ -0.49
LRTM1-201ENST00000273286 TLR2O60603 784 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 CIAO1O76071 339 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 UBTFL1P0CB47 393 aaPredicted RBP12□□□□□ -0.49
LRTM1-201ENST00000273286 PRMT2P55345 433 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 PPATQ06203 517 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 PPIL2Q13356 520 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 PHLDB3Q6NSJ2 640 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 APOBEC3HQ6NTF7 200 aaKnown RBP12□□□□□ -0.49
LRTM1-201ENST00000273286 KLHL23Q8NBE8 558 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 FAM151AQ8WW52 585 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
LRTM1-201ENST00000273286 TM4SF5O14894 197 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 LRP8Q14114 963 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 ZGPATQ8N5A5 531 aaKnown RBP11.99□□□□□ -0.49
LRTM1-201ENST00000273286 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 SNCAIPQ9Y6H5 919 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
LRTM1-201ENST00000273286 SALL1Q9NSC2 1324 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 H3BRJ5 948 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 FAM13AO94988 1023 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 ABL1P00519 1130 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 NPR3P17342 541 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 RFX5P48382 616 aaPredicted RBP11.98□□□□□ -0.49
LRTM1-201ENST00000273286 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 FAM43AQ8N2R8 423 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 PMEPA1Q969W9 287 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 ZNF333Q96JL9 665 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 HHIPQ96QV1 700 aa11.98□□□□□ -0.49
LRTM1-201ENST00000273286 CENPFP49454 3210 aa11.97□□□□□ -0.49
LRTM1-201ENST00000273286 PDE2AO00408 941 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-201ENST00000273286 LDHBP07195 334 aaKnown RBP11.97□□□□□ -0.49
LRTM1-201ENST00000273286 IL15P40933 162 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-201ENST00000273286 CACNB3P54284 484 aa11.97□□□□□ -0.49
LRTM1-201ENST00000273286 ZNF211Q13398 564 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-201ENST00000273286 ATP2B3Q16720 1220 aa11.97□□□□□ -0.49
LRTM1-201ENST00000273286 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
LRTM1-201ENST00000273286 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
LRTM1-201ENST00000273286 PHACTR2O75167 634 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
LRTM1-201ENST00000273286 DUOXA2Q1HG44 320 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.49
LRTM1-201ENST00000273286 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
LRTM1-201ENST00000273286 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms