RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 ATP8A1Q9Y2Q0 1164 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 CLGNO14967 610 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 ATP5DP30049 168 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 FAM26FQ5R3K3 315 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 P2RX5Q93086 422 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 IQCDQ96DY2 449 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 FUCA2Q9BTY2 467 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 RAB17Q9H0T7 212 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 LMTK3Q96Q04 1460 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 GCNT3O95395 438 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 KRT15P19012 456 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 LRRC41Q15345 812 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 MAEAQ7L5Y9 396 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 NOVA2Q9UNW9 492 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 SEMA3EO15041 775 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 WDR78Q5VTH9 848 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 FBXW10Q5XX13 1052 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 ENAHQ8N8S7 591 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 DDX12PQ92771 950 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CALUO43852 315 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 DESP17661 470 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 APBA1Q02410 837 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 MECOMQ03112 1051 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 ALX1Q15699 326 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 DHTKD1Q96HY7 919 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 INTS9Q9NV88 658 aaKnown RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 ANTXR2P58335 489 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CUL4BQ13620 913 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 RNF10Q8N5U6 811 aaKnown RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
VPS33A-201ENST00000267199 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 FHOD1Q9Y613 1164 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CAPN12Q6ZSI9 719 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
VPS33A-201ENST00000267199 CYP2D6P10635 497 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 LRRN4CLQ8ND94 238 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 PLCB1Q9NQ66 1216 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 TMEM131LA2VDJ0 1609 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 CFBP00751 764 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 GUCY2CP25092 1073 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 ZBED6P86452 979 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 SYCE1Q8N0S2 351 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
VPS33A-201ENST00000267199 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 ARMCX3Q9UH62 379 aaPredicted RBP12.66□□□□□ -0.38
VPS33A-201ENST00000267199 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 KRT5P13647 590 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 SP4Q02446 784 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 HHATQ5VTY9 493 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 NMT2O60551 498 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 PRDX5P30044 214 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 DHX9Q08211 1270 aaKnown RBP12.66□□□□□ -0.38
VPS33A-201ENST00000267199 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
VPS33A-201ENST00000267199 CUEDC2Q9H467 287 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
VPS33A-201ENST00000267199 EXOC3O60645 756 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
VPS33A-201ENST00000267199 PLCG1P19174 1290 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 CCNE1P24864 410 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 KIF11P52732 1056 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 PRR16Q569H4 304 aa12.65□□□□□ -0.38
VPS33A-201ENST00000267199 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms