RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RBL2Q08999 1139 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 RINT1Q6NUQ1 792 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 CAPN7Q9Y6W3 813 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 INSRP06213 1382 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 SOS2Q07890 1332 aaPredicted RBP13.21□□□□□ -0.3
COL8A1-201ENST00000261037 TRIM37O94972 964 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 GUCY2DQ02846 1103 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
COL8A1-201ENST00000261037 MUM1Q2TAK8 710 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 PI16Q6UXB8 463 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 FTOQ9C0B1 505 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KIF11P52732 1056 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 XDHP47989 1333 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 MAP7Q14244 749 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KCTD16Q68DU8 428 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 COA7Q96BR5 231 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KIF3CO14782 793 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 WDR46O15213 610 aaKnown RBP13.2□□□□□ -0.3
COL8A1-201ENST00000261037 PDE8BO95263 885 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 BRD3Q15059 726 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 KRT26Q7Z3Y9 468 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 LRRN2O75325 713 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 MFAP3P55082 362 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 RSPH3Q86UC2 560 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL8A1-201ENST00000261037 HDAC11Q96DB2 347 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
COL8A1-201ENST00000261037 ZMYND10O75800 440 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 DYNLT1P63172 113 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 LARP4BQ92615 738 aaKnown RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 PYCARDQ9ULZ3 195 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 A6NNZ2 444 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 ARPP19P56211 112 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 C2orf54Q08AI8 447 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 UBE2SQ16763 222 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 JADE1Q6IE81 842 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 CYP2D7A0A087X1C5 515 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 NR2F2P24468 414 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 OSTNP61366 133 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 MCUQ8NE86 351 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
COL8A1-201ENST00000261037 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
COL8A1-201ENST00000261037 H0YCG3 227 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 GOLGA8SH3BPF8 625 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 TFDP1Q14186 410 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 CCDC38Q502W7 563 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 RAPH1Q70E73 1250 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 RYBPQ8N488 228 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 TRIML1Q8N9V2 468 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 ANKRD36BP1Q96IX9 119 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 EPN1Q9Y6I3 576 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 TTLL1O95922 423 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 KCTD2Q14681 263 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 SLC35F6Q8N357 371 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 RPGRIP1Q96KN7 1286 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 AMNQ9BXJ7 453 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 UBE3CQ15386 1083 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 TBCKQ8TEA7 893 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 METTL14Q9HCE5 456 aaKnown RBP13.18□□□□□ -0.3
COL8A1-201ENST00000261037 METP08581 1390 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
COL8A1-201ENST00000261037 RNF8O76064 485 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms