RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 BRPF3Q9ULD4 1205 aa26.59■■□□□ 1.85
LSM4-201ENST00000252816 Q9Y3F1 56 aa26.59■■□□□ 1.85
LSM4-201ENST00000252816 B4DLN1 442 aa26.58■■□□□ 1.85
LSM4-201ENST00000252816 HOXA13P31271 388 aaPredicted RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 MAGEA10P43363 369 aaPredicted RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 MRPL12P52815 198 aaKnown RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 TRAF1Q13077 416 aa26.58■■□□□ 1.85
LSM4-201ENST00000252816 FSCN1Q16658 493 aaKnown RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 APOA5Q6Q788 366 aa26.58■■□□□ 1.85
LSM4-201ENST00000252816 RRP36Q96EU6 259 aaKnown RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 JAKMIP1Q96N16 626 aaKnown RBP26.58■■□□□ 1.85
LSM4-201ENST00000252816 AP5M1Q9H0R1 490 aa26.58■■□□□ 1.85
LSM4-201ENST00000252816 STARD7Q9NQZ5 370 aa26.58■■□□□ 1.85
LSM4-201ENST00000252816 HMGB1P09429 215 aaKnown RBP26.57■■□□□ 1.84
LSM4-201ENST00000252816 EIF2AK2P19525 551 aaKnown RBP26.57■■□□□ 1.84
LSM4-201ENST00000252816 TLE2Q04725 743 aa26.57■■□□□ 1.84
LSM4-201ENST00000252816 ARHGEF16Q5VV41 709 aa26.57■■□□□ 1.84
LSM4-201ENST00000252816 TMTC3Q6ZXV5 915 aa26.57■■□□□ 1.84
LSM4-201ENST00000252816 IWS1Q96ST2 819 aa26.57■■□□□ 1.84
LSM4-201ENST00000252816 PXMP2Q9NR77 195 aa26.57■■□□□ 1.84
LSM4-201ENST00000252816 SYNE3Q6ZMZ3 975 aa26.56■■□□□ 1.84
LSM4-201ENST00000252816 SAMD3Q8N6K7 520 aa26.56■■□□□ 1.84
LSM4-201ENST00000252816 SCFD2Q8WU76 684 aa26.56■■□□□ 1.84
LSM4-201ENST00000252816 GLT1D1Q96MS3 346 aa26.56■■□□□ 1.84
LSM4-201ENST00000252816 MAP3K20Q9NYL2 800 aaKnown RBP26.56■■□□□ 1.84
LSM4-201ENST00000252816 GCOM1H8Y6P7 765 aaPredicted RBP26.55■■□□□ 1.84
LSM4-201ENST00000252816 ARIH2O95376 493 aa26.55■■□□□ 1.84
LSM4-201ENST00000252816 POLR2MP0CAP2 368 aa26.55■■□□□ 1.84
LSM4-201ENST00000252816 CCDC82Q8N4S0 544 aa26.55■■□□□ 1.84
LSM4-201ENST00000252816 ELP1O95163 1332 aa26.55■■□□□ 1.84
LSM4-201ENST00000252816 hCG_1642624A0A1W2PR95 340 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 PQBP1O60828 265 aaKnown RBP26.54■■□□□ 1.84
LSM4-201ENST00000252816 NR3C2P08235 984 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 MDM2Q00987 491 aaPredicted RBP26.54■■□□□ 1.84
LSM4-201ENST00000252816 PPP2R5BQ15173 497 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 STXBP2Q15833 593 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 CXCL17Q6UXB2 119 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 SH3RF1Q7Z6J0 888 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 COPS5Q92905 334 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 USP26Q9BXU7 913 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 PDLIM7Q9NR12 457 aa26.54■■□□□ 1.84
LSM4-201ENST00000252816 SEC63Q9UGP8 760 aaKnown RBP26.54■■□□□ 1.84
LSM4-201ENST00000252816 KLF18A0A0U1RQI7 1052 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 ZBTB43O43298 467 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 EPB41L2O43491 1005 aaKnown RBP26.53■■□□□ 1.84
LSM4-201ENST00000252816 BMP8BP34820 402 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 CCDC62Q6P9F0 684 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 BLOC1S2Q6QNY1 142 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 SEPT14Q6ZU15 432 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 VTI1AQ96AJ9 217 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 PDCD2LQ9BRP1 358 aa26.53■■□□□ 1.84
LSM4-201ENST00000252816 PRDM5Q9NQX1 630 aaPredicted RBP26.53■■□□□ 1.84
LSM4-201ENST00000252816 TRIM43BA6NCK2 446 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 TXNP10599 105 aaKnown RBP26.52■■□□□ 1.84
LSM4-201ENST00000252816 CDK7P50613 346 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 RTN1Q16799 776 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 Q6ZUG5 572 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 ANKRD33Q7Z3H0 272 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 FCHSD1Q86WN1 690 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 OR6J1Q8NGC5 347 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 IL31RAQ8NI17 732 aa26.52■■□□□ 1.84
LSM4-201ENST00000252816 TRIM43Q96BQ3 446 aaPredicted RBP26.52■■□□□ 1.84
LSM4-201ENST00000252816 NKRFO15226 690 aaKnown RBP eCLIP26.51■■□□□ 1.83
LSM4-201ENST00000252816 EIF3JO75822 258 aaKnown RBP26.51■■□□□ 1.83
LSM4-201ENST00000252816 RPS6KB1P23443 525 aa26.51■■□□□ 1.83
LSM4-201ENST00000252816 FUT2Q10981 343 aa26.51■■□□□ 1.83
LSM4-201ENST00000252816 TTLL4Q14679 1199 aa26.51■■□□□ 1.83
LSM4-201ENST00000252816 FAM217BQ9NTX9 383 aaPredicted RBP26.51■■□□□ 1.83
LSM4-201ENST00000252816 RBM28Q9NW13 759 aaKnown RBP26.51■■□□□ 1.83
LSM4-201ENST00000252816 PRKAG2Q9UGJ0 569 aa26.51■■□□□ 1.83
LSM4-201ENST00000252816 CNTNAP5Q8WYK1 1306 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 A0A0U1RQG5 324 aaPredicted RBP26.5■■□□□ 1.83
LSM4-201ENST00000252816 GOLGA8AA7E2F4 631 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 GOLGA8BA8MQT2 603 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 ARVCFO00192 962 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 ZEB2O60315 1214 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 CLTBP09497 229 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 FXR1P51114 621 aaKnown RBP eCLIP26.5■■□□□ 1.83
LSM4-201ENST00000252816 FGD1P98174 961 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 APOBRQ0VD83 1088 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 PGM5Q15124 567 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 TOX2Q96NM4 488 aa26.5■■□□□ 1.83
LSM4-201ENST00000252816 GRIN2DO15399 1336 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 MYCLP12524 364 aaPredicted RBP26.49■■□□□ 1.83
LSM4-201ENST00000252816 CASTP20810 708 aaKnown RBP26.49■■□□□ 1.83
LSM4-201ENST00000252816 FAAP100Q0VG06 881 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 LY6KQ17RY6 165 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 USP17L6PQ6QN14 398 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 VSIG10LQ86VR7 867 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 BRF1Q92994 677 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 LAMA3Q16787 3333 aa26.49■■□□□ 1.83
LSM4-201ENST00000252816 A0A1W2PPC1 479 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 MEIS2O14770 477 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 CABYRO75952 493 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 RGS20O76081 388 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 ITGB8P26012 769 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 PSMA5P28066 241 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 CDC27P30260 824 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 CPT1AP50416 773 aa26.48■■□□□ 1.83
LSM4-201ENST00000252816 RCAN1P53805 252 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms