RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RWDD2AQ9UIY3 292 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 COL4A4P53420 1690 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 OTOFQ9HC10 1997 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ATP8B3O60423 1300 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 LAD1O00515 517 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MPHOSPH10O00566 681 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 POLR2DO15514 142 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NPM3O75607 178 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TRIM21P19474 475 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 UBA7P41226 1012 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 PLA2G4AP47712 749 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 GRAPQ13588 217 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TMEM266Q2M3C6 531 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 RRP12Q5JTH9 1297 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SOGA3Q5TF21 947 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 PRR5LQ6MZQ0 368 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SRLQ86TD4 932 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TAX1BP1Q86VP1 789 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CERS3Q8IU89 383 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 GRAPLQ8TC17 118 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 C7orf43Q8WVR3 580 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 JAKMIP2Q96AA8 810 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CALML4Q96GE6 196 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC42Q96M95 316 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NSRP1Q9H0G5 558 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TMEM60Q9H2L4 133 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SAMSN1Q9NSI8 373 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 BLOC1S4Q9NUP1 217 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 PUF60Q9UHX1 559 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC194A0A1B0GVG4 234 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MFAP3LO75121 409 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 EZRP15311 586 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 KRT9P35527 623 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 STAT6P42226 847 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NLRP5P59047 1200 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CDK17Q00537 523 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 IFFO1Q0D2I5 559 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 EMBQ6PCB8 327 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TOGARAM2Q6ZUX3 1019 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CMTR1Q8N1G2 835 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MICALL1Q8N3F8 863 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 STAG2Q8N3U4 1231 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CERS5Q8N5B7 392 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NEK11Q8NG66 645 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CPLX3Q8WVH0 158 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 JADE2Q9NQC1 790 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 BARHL2Q9NY43 387 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DICER1Q9UPY3 1922 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DOCK1Q14185 1865 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MAGEB6P1A0A0J9YX57 407 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ATP2B1P20020 1258 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 LONP1P36776 959 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 UBXN1Q04323 297 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 IKQ13123 557 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DRP2Q13474 957 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CASP8Q14790 479 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TMEM119Q4V9L6 283 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 FIGNQ5HY92 759 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 WDR93Q6P2C0 686 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 B3GNT9Q6UX72 402 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MMS22LQ6ZRQ5 1243 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SYMPKQ92797 1274 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SECISBP2LQ93073 1101 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DHX58Q96C10 678 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DEFB129Q9H1M3 183 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 EXOC1Q9NV70 894 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ADGRG1Q9Y653 693 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ABCB11O95342 1321 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 A0A1W2PQC6 194 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 GCOM1H8Y6P7 765 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 OPLAHO14841 1288 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MYZAPP0CAP1 466 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 EPHB4P54760 987 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MARSP56192 900 aaKnown RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 RPS8P62241 208 aaKnown RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 GHRHRQ02643 423 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 NNTQ13423 1086 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ARHGAP27Q6ZUM4 889 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 LZTS2Q9BRK4 669 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 MRIQ9BWK5 157 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ANKZF1Q9H8Y5 726 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ACTR5Q9H9F9 607 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 PDE11AQ9HCR9 933 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 HYOU1Q9Y4L1 999 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 EPN1Q9Y6I3 576 aaPredicted RBP4.6□□□□□ -1.67
UBE4A-201ENST00000252108 PFASO15067 1338 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF263O14978 683 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 RHOXF2BP0C7M4 288 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC172P0C7W6 258 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 SCG2P13521 617 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 CACNA2D4Q7Z3S7 1137 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 NEDD1Q8NHV4 660 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 PNMA5Q96PV4 448 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 RHOXF2Q9BQY4 288 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 THAP9Q9H5L6 903 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 LRP2BPQ9P2M1 347 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 STK24Q9Y6E0 443 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 TULP2O00295 520 aa4.6□□□□□ -1.67
UBE4A-201ENST00000252108 AKR1B10O60218 316 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms