RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
VPS50-201ENST00000251739 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 SLC16A2P36021 539 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 ALDH5A1P51649 535 aaPredicted RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 ZNF543Q08ER8 600 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 PSRC1Q6PGN9 363 aaPredicted RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 TET1Q8NFU7 2136 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 VWCEQ96DN2 955 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
VPS50-201ENST00000251739 SEZ6LQ9BYH1 1024 aa12.15□□□□□ -0.46
VPS50-201ENST00000251739 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 FOSL2P15408 326 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 EDNRBP24530 442 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 CYP2C18P33260 490 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 HAND2P61296 217 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 AAMPQ13685 434 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
VPS50-201ENST00000251739 GRIN2CQ14957 1233 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 ZNF365Q70YC5 407 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 TTC14Q96N46 770 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 LNPKQ9C0E8 428 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 IL23AQ9NPF7 189 aa12.14□□□□□ -0.47
VPS50-201ENST00000251739 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
VPS50-201ENST00000251739 NEDD4P46934 1319 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 RRP12Q5JTH9 1297 aaKnown RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 HERVK_113Q902F9 699 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 TIFAQ96CG3 184 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 PBX4Q9BYU1 374 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 CXXC1Q9P0U4 656 aaPredicted RBP12.13□□□□□ -0.47
VPS50-201ENST00000251739 PNMA2Q9UL42 364 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
VPS50-201ENST00000251739 GRXCR1A8MXD5 290 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 B4GALT4O60513 344 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 ACRP10323 421 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 PBX2P40425 430 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 NT5C2P49902 561 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 PURAQ00577 322 aaKnown RBP12.12□□□□□ -0.47
VPS50-201ENST00000251739 KIAA1211Q6ZU35 1233 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 USP38Q8NB14 1042 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
VPS50-201ENST00000251739 TOMM22Q9NS69 142 aa12.12□□□□□ -0.47
VPS50-201ENST00000251739 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 ZEB2O60315 1214 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 SDSP20132 328 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 PSMC6P62333 389 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
VPS50-201ENST00000251739 NUCB1Q02818 461 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
VPS50-201ENST00000251739 MFSD6Q6ZSS7 791 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 MAF1Q9H063 256 aa12.11□□□□□ -0.47
VPS50-201ENST00000251739 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
VPS50-201ENST00000251739 PRRC2BQ5JSZ5 2229 aaKnown RBP12.11□□□□□ -0.47
VPS50-201ENST00000251739 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 A6NJR5 290 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
VPS50-201ENST00000251739 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 ESR2Q92731 530 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
VPS50-201ENST00000251739 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
VPS50-201ENST00000251739 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
VPS50-201ENST00000251739 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.47
VPS50-201ENST00000251739 IGHDP01880 384 aa12.09□□□□□ -0.47
VPS50-201ENST00000251739 CALML3P27482 149 aa12.09□□□□□ -0.47
VPS50-201ENST00000251739 CPT1AP50416 773 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms