RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 VWA5AO00534 786 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 SMC2O95347 1197 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 CFBP00751 764 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
SDF2-201ENST00000247020 PNOCQ13519 176 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 COG2Q14746 738 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 ERO1BQ86YB8 467 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
SDF2-201ENST00000247020 DNAJC25Q9H1X3 360 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 CBX8Q9HC52 389 aa16.03■□□□□ 0.16
SDF2-201ENST00000247020 PDXDC2PQ6P474 469 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 CABP7Q86V35 215 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 SMARCE1Q969G3 411 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 PPP1R9BQ96SB3 815 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 P2RX7Q99572 595 aaKnown RBP16.02■□□□□ 0.16
SDF2-201ENST00000247020 HOXC10Q9NYD6 342 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 PCDHA5Q9Y5H7 936 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
SDF2-201ENST00000247020 SPDYE5A6NIY4 337 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 CXCL11O14625 94 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 STAT6P42226 847 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 TECP42680 631 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 TXKP42681 527 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 DGKZQ13574 1117 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 PRKG1Q13976 671 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 TKFCQ3LXA3 575 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 EAPPQ56P03 285 aaPredicted RBP16.01■□□□□ 0.15
SDF2-201ENST00000247020 CT47A1Q5JQC4 288 aaPredicted RBP16.01■□□□□ 0.15
SDF2-201ENST00000247020 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 REPS2Q8NFH8 660 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 HAS1Q92839 578 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 CALML4Q96GE6 196 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 FAM20AQ96MK3 541 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
SDF2-201ENST00000247020 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 HOXA13P31271 388 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 PPIL2Q13356 520 aa16■□□□□ 0.15
SDF2-201ENST00000247020 IQCB1Q15051 598 aa16■□□□□ 0.15
SDF2-201ENST00000247020 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
SDF2-201ENST00000247020 ATG4CQ96DT6 458 aa16■□□□□ 0.15
SDF2-201ENST00000247020 TTC12Q9H892 705 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 DACH1Q9UI36 760 aa16■□□□□ 0.15
SDF2-201ENST00000247020 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
SDF2-201ENST00000247020 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
SDF2-201ENST00000247020 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
SDF2-201ENST00000247020 RPTORQ8N122 1335 aa16■□□□□ 0.15
SDF2-201ENST00000247020 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 MARCH6O60337 910 aa16■□□□□ 0.15
SDF2-201ENST00000247020 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 DPYDQ12882 1025 aa16■□□□□ 0.15
SDF2-201ENST00000247020 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
SDF2-201ENST00000247020 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 RASSF8Q8NHQ8 419 aa16■□□□□ 0.15
SDF2-201ENST00000247020 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
SDF2-201ENST00000247020 ERCC4Q92889 916 aaPredicted RBP16■□□□□ 0.15
SDF2-201ENST00000247020 LENG9Q96B70 501 aa16■□□□□ 0.15
SDF2-201ENST00000247020 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
SDF2-201ENST00000247020 STK17AQ9UEE5 414 aa16■□□□□ 0.15
SDF2-201ENST00000247020 KDM3AQ9Y4C1 1321 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 ALAS1P13196 640 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
SDF2-201ENST00000247020 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
SDF2-201ENST00000247020 MORC3Q14149 939 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 HYIQ5T013 277 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 KRT79Q5XKE5 535 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 CPXCR1Q8N123 301 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 MLKLQ8NB16 471 aa15.99■□□□□ 0.15
SDF2-201ENST00000247020 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
SDF2-201ENST00000247020 PP2D1A8MPX8 630 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 SMTNL1A8MU46 457 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 BECN2A8MW95 431 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 GOLGA6L19H0YKK7 550 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 IKBKBO14920 756 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 FOXN1O15353 648 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 PRR29P0C7W0 189 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 ZNF76P36508 570 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 FKBP1BP68106 108 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 DPCR1Q3MIW9 517 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 LUZP1Q86V48 1076 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 TBC1D5Q92609 795 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 MMTAG2Q9BU76 263 aaKnown RBP15.98■□□□□ 0.15
SDF2-201ENST00000247020 TEX13BQ9BXU2 312 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
SDF2-201ENST00000247020 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 KBTBD4Q9NVX7 518 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms