RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 KLHDC7AQ5VTJ3 777 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
DDX55-201ENST00000238146 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 SLC39A2Q9NP94 309 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDX55-201ENST00000238146 CYTH3O43739 400 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 NNTQ13423 1086 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 CNNM4Q6P4Q7 775 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 IQCKQ8N0W5 287 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
DDX55-201ENST00000238146 STXBP3O00186 592 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 NDUFAB1O14561 156 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 GLI1P08151 1106 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 OR52Z1P0C646 297 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 TFAP4Q01664 338 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 GRM4Q14833 912 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 ASTE1Q2TB18 679 aaPredicted RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 GLE1Q53GS7 698 aaKnown RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 SWT1Q5T5J6 900 aaKnown RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 GALNT17Q6IS24 598 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 BAP1Q92560 729 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 BARHL2Q9NY43 387 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 HNRNPH1P31943 449 aaKnown RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 CARSP49589 748 aaKnown RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 ATP1A2P50993 1020 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 RASSF7Q02833 373 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 GFPT1Q06210 699 aaPredicted RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
DDX55-201ENST00000238146 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
DDX55-201ENST00000238146 BUB1O43683 1085 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 AMPD3Q01432 767 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 MAN2A1Q16706 1144 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 IFT20Q8IY31 132 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 CEP89Q96ST8 783 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
DDX55-201ENST00000238146 GDF3Q9NR23 364 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 NFU1Q9UMS0 254 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 CFAP221Q4G0U5 840 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
DDX55-201ENST00000238146 NOX5Q96PH1 765 aa17.18■□□□□ 0.34
DDX55-201ENST00000238146 ZSCAN5CA6NGD5 496 aaPredicted RBP17.17■□□□□ 0.34
DDX55-201ENST00000238146 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
DDX55-201ENST00000238146 SLC1A4P43007 532 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 GNAQP50148 359 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 LETM2Q2VYF4 491 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 B4GALNT4Q76KP1 1039 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 CCDC87Q9NVE4 849 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 GEMIN8Q9NWZ8 242 aaKnown RBP17.17■□□□□ 0.34
DDX55-201ENST00000238146 ESYT3A0FGR9 886 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 USP17L8P0C7I0 530 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 TECP42680 631 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 CFAP58Q5T655 872 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 RNF10Q8N5U6 811 aaKnown RBP17.17■□□□□ 0.34
DDX55-201ENST00000238146 ANKS1AQ92625 1134 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
DDX55-201ENST00000238146 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
DDX55-201ENST00000238146 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
DDX55-201ENST00000238146 PRDX5P30044 214 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 KDM7AQ6ZMT4 941 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 EPB41L5Q9HCM4 733 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 ZEB2O60315 1214 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 HEXIM1O94992 359 aaKnown RBP17.16■□□□□ 0.34
DDX55-201ENST00000238146 ERCC3P19447 782 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 KLRK1P26718 216 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 GUCY2DQ02846 1103 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 FBXO33Q7Z6M2 555 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 CNPY4Q8N129 248 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 IFT81Q8WYA0 676 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 PIK3R5Q8WYR1 880 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 BSDC1Q9NW68 430 aaPredicted RBP17.16■□□□□ 0.34
DDX55-201ENST00000238146 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 TSKSQ9UJT2 592 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 MTMR7Q9Y216 660 aa17.16■□□□□ 0.34
DDX55-201ENST00000238146 ATXN2Q99700 1313 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms