RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HAS1Q92839 578 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 TUBGCP2Q9BSJ2 902 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 NUP58Q9BVL2 599 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
UBE3D-201ENST00000237186 H0YIN7 160 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 SLC16A2P36021 539 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 TUBB2AQ13885 445 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 UBE2SQ16763 222 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 CERKLQ49MI3 558 aaPredicted RBP18.08■□□□□ 0.49
UBE3D-201ENST00000237186 HYIQ5T013 277 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 SH3BP5LQ7L8J4 393 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 KIAA0825Q8IV33 1275 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 ARID3AQ99856 593 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 TUBB2BQ9BVA1 445 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 MYO1AQ9UBC5 1043 aa18.08■□□□□ 0.49
UBE3D-201ENST00000237186 DDX25Q9UHL0 483 aaKnown RBP18.08■□□□□ 0.49
UBE3D-201ENST00000237186 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.49
UBE3D-201ENST00000237186 DDTLA6NHG4 134 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 USP11P51784 963 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 ATP2B2Q01814 1243 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 EHHADHQ08426 723 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 PSMD2Q13200 908 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 SIAH1Q8IUQ4 282 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 CREBRFQ8IUR6 639 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 GUF1Q8N442 669 aaKnown RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 CDK5RAP3Q96JB5 506 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 TTYH3Q9C0H2 523 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 COL11A2P13942 1736 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 CYP3A7-CYP3A51PA0A087WV96 503 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 ECE2O60344 883 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 CYP3A7P24462 503 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 MCM6Q14566 821 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 SEPT2Q15019 361 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 ARHGAP29Q52LW3 1261 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 FIGNQ5HY92 759 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 MCTP2Q6DN12 878 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 SNX29Q8TEQ0 813 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 IQCDQ96DY2 449 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 CNOT6LQ96LI5 555 aaKnown RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 MBOAT7Q96N66 472 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 IRX2Q9BZI1 471 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 SEMA6BQ9H3T3 888 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 LZTFL1Q9NQ48 299 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 EPN1Q9Y6I3 576 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-201ENST00000237186 ABCB11O95342 1321 aa18.07■□□□□ 0.48
UBE3D-201ENST00000237186 POTEMA6NI47 508 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 SLC1A4P43007 532 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 CBX1P83916 185 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 MEA1Q16626 185 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 QRICH1Q2TAL8 776 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 SLFN13Q68D06 897 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 MOXD1Q6UVY6 613 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 RSRC2Q7L4I2 434 aaKnown RBP18.06■□□□□ 0.48
UBE3D-201ENST00000237186 SMAP1Q8IYB5 467 aaPredicted RBP18.06■□□□□ 0.48
UBE3D-201ENST00000237186 ERGIC2Q96RQ1 377 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 NUDT12Q9BQG2 462 aa18.06■□□□□ 0.48
UBE3D-201ENST00000237186 SLURP2P0DP57 97 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ARHGAP25P42331 645 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 SF3B2Q13435 895 aaKnown RBP18.05■□□□□ 0.48
UBE3D-201ENST00000237186 MIIPQ5JXC2 388 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ZNF662Q6ZS27 426 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 GMCL1P1Q8NEA9 526 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 PCDHA12Q9UN75 941 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 PCDHAC2Q9Y5I4 1007 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 A0A0U1RQJ8 604 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 B4DLN1 442 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ENTPD3O75355 529 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 NDUFA10O95299 355 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
UBE3D-201ENST00000237186 PPP2R3AQ06190 1150 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 WDR59Q6PJI9 974 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ATRIPQ8WXE1 791 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 CNKSR1Q969H4 720 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 GMCL1Q96IK5 515 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 CHP1Q99653 195 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 KCNMB3Q9NPA1 279 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 ATRNL1Q5VV63 1379 aa18.05■□□□□ 0.48
UBE3D-201ENST00000237186 A0A1W2PQJ5 194 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 RASSF10A6NK89 507 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 BAG6P46379 1132 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 CACNB3P54284 484 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 LRRC63Q05C16 580 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 TCP10Q12799 353 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 AP3B2Q13367 1082 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 TSR1Q2NL82 804 aaKnown RBP18.04■□□□□ 0.48
UBE3D-201ENST00000237186 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 GPR161Q8N6U8 529 aaKnown RBP18.04■□□□□ 0.48
UBE3D-201ENST00000237186 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 NT5C3AQ9H0P0 336 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 SYNPO2Q9UMS6 1093 aa18.04■□□□□ 0.48
UBE3D-201ENST00000237186 FGFR1OPO95684 399 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms