RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 RTFDC1Q9BY42 306 aaPredicted RBP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 LAMB1P07942 1786 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 MYH1P12882 1939 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 AGPSO00116 658 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 KCNA3P22001 575 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 IRAK1P51617 712 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 VAV2P52735 878 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 ENAHQ8N8S7 591 aaPredicted RBP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 EYA3Q99504 573 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 MTRQ99707 1265 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 EXOC1Q9NV70 894 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 ZEB2O60315 1214 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 RHOBTB3O94955 611 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 HNRNPH3P31942 346 aaKnown RBP17.72■□□□□ 0.43
SF3A2-201ENST00000221494 KIF5AQ12840 1032 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
SF3A2-201ENST00000221494 FAM43BQ6ZT52 329 aaPredicted RBP17.72■□□□□ 0.43
SF3A2-201ENST00000221494 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 SH3GLB2Q9NR46 395 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 SNX12Q9UMY4 172 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
SF3A2-201ENST00000221494 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 USO1O60763 962 aaKnown RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 TCP1P17987 556 aaKnown RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 STAT6P42226 847 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 EPHB4P54760 987 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 GTF2IP78347 998 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 TROAPQ12815 778 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 DIXDC1Q155Q3 683 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 DOK7Q18PE1 504 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 CAVIN3Q969G5 261 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 ERGIC2Q96RQ1 377 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 CAPS2Q9BXY5 557 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 TRIM10Q9UDY6 481 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 LAD1O00515 517 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 TACC1O75410 805 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 DPEP1P16444 411 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 GSTO1P78417 241 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 MTFR1LQ9H019 292 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
SF3A2-201ENST00000221494 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
SF3A2-201ENST00000221494 SRRM3A6NNA2 597 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-201ENST00000221494 ENC1O14682 589 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 LCA5LO95447 670 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 IDEP14735 1019 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 MCTP2Q6DN12 878 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 ARHGAP27Q6ZUM4 889 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
SF3A2-201ENST00000221494 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 NHEJ1Q9H9Q4 299 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-201ENST00000221494 RNF14Q9UBS8 474 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 SLX4Q8IY92 1834 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 ERLIN2O94905 339 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 SCG2P13521 617 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 PPP4CP60510 307 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
SF3A2-201ENST00000221494 SPA17Q15506 151 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 EMC10Q5UCC4 262 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
SF3A2-201ENST00000221494 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 TSKSQ9UJT2 592 aa17.7■□□□□ 0.42
SF3A2-201ENST00000221494 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
SF3A2-201ENST00000221494 C21orf2O43822 256 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 LDHCP07864 332 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 PSEN1P49768 467 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 PFKFB3Q16875 520 aaPredicted RBP17.69■□□□□ 0.42
SF3A2-201ENST00000221494 PODNQ7Z5L7 613 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 C4orf32Q8N8J7 132 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 FAM163AQ96GL9 167 aaPredicted RBP17.69■□□□□ 0.42
SF3A2-201ENST00000221494 TRIM47Q96LD4 638 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
SF3A2-201ENST00000221494 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 ABCB11O95342 1321 aa17.69■□□□□ 0.42
SF3A2-201ENST00000221494 WNT7AO00755 349 aa17.68■□□□□ 0.42
SF3A2-201ENST00000221494 ORC4O43929 436 aa17.68■□□□□ 0.42
SF3A2-201ENST00000221494 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
SF3A2-201ENST00000221494 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
SF3A2-201ENST00000221494 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
SF3A2-201ENST00000221494 DCP1AQ9NPI6 582 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms