RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SH3BP5LQ7L8J4 393 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 PRIMPOLQ96LW4 560 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ROBO3Q96MS0 1386 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 FCER1AP12319 257 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 GABPAQ06546 454 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 CCDC150Q8NCX0 1101 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 TBC1D7Q9P0N9 293 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 M0R2N6 131 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 GH2P01242 217 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
USP11-201ENST00000218348 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 IGSF22Q8N9C0 903 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
USP11-201ENST00000218348 ZHX3Q9H4I2 956 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 SLC39A2Q9NP94 309 aa11.18□□□□□ -0.62
USP11-201ENST00000218348 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 LONP1P36776 959 aaKnown RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 ZNF543Q08ER8 600 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 MCM6Q14566 821 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 GPR162Q16538 588 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SPATA1Q5VX52 437 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SPECC1LQ69YQ0 1117 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 LRRN4CLQ8ND94 238 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 PIK3R5Q8WYR1 880 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 GSDMAQ96QA5 445 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SOWAHDA6NJG2 315 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 ZNF18P17022 549 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 HOXA13P31271 388 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 RBL2Q08999 1139 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 PAK1Q13153 545 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 LRRC41Q15345 812 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 CALCRLQ16602 461 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 NT5DC1Q5TFE4 455 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 TRIM47Q96LD4 638 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 SH3GLB2Q9NR46 395 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 MYH8P13535 1937 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 DDNO94850 711 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 CCDC172P0C7W6 258 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 UBXN2AP68543 259 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 ICA1Q05084 483 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 PDE4DQ08499 809 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 PPFIBP1Q86W92 1011 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 LRWD1Q9UFC0 647 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 ZNF215Q9UL58 517 aaPredicted RBP11.17□□□□□ -0.62
USP11-201ENST00000218348 PCDHA1Q9Y5I3 950 aa11.17□□□□□ -0.62
USP11-201ENST00000218348 NKRFO15226 690 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP11-201ENST00000218348 ECE1P42892 770 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 TNIP1Q15025 636 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 FCHSD1Q86WN1 690 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 SPATA20Q8TB22 786 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 SRRTQ9BXP5 876 aaKnown RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 ASTN2O75129 1339 aaPredicted RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 KCNA4P22459 653 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 CASP14P31944 242 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 KRT31Q15323 416 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 ZNF513Q8N8E2 541 aaPredicted RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 TC2NQ8N9U0 490 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 JDP2Q8WYK2 163 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
USP11-201ENST00000218348 LZTS2Q9BRK4 669 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 IDI2Q9BXS1 227 aa11.16□□□□□ -0.62
USP11-201ENST00000218348 WNT10BO00744 389 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 URI1O94763 535 aaPredicted RBP11.15□□□□□ -0.62
USP11-201ENST00000218348 STAT3P40763 770 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 SATB1Q01826 763 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 STK4Q13043 487 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 ARL6IP4Q66PJ3 421 aaKnown RBP11.15□□□□□ -0.62
USP11-201ENST00000218348 TRIML1Q8N9V2 468 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 RIOX1Q9H6W3 641 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
USP11-201ENST00000218348 RNF225M0QZC1 329 aaPredicted RBP11.15□□□□□ -0.62
USP11-201ENST00000218348 UBXN1Q04323 297 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms