RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Madcam1Q61826 405 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Krt39Q6IFX4 482 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ddx55Q6ZPL9 600 aaKnown RBP16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ankk1Q8BZ25 745 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Dcaf8Q8N7N5 591 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Atp5c1Q91VR2 298 aaKnown RBP16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 F11Q91Y47 624 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ddx27Q921N6 760 aaKnown RBP16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Mkrn1Q9QXP6 481 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Fzd9Q9R216 592 aa16.04■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Jakmip3Q5DTN8 844 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Pnma5Q5DTT8 618 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Scaf8Q6DID3 1268 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Mtss1lQ6P9S0 715 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Brd2Q7JJ13 798 aaKnown RBP16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Dusp9Q7TNL7 452 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Frmd3Q8BHD4 595 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Kdm4bQ91VY5 1086 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Q91WD4 421 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ccnt1Q9QWV9 724 aaKnown RBP16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Vav3Q9R0C8 847 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Lypla2Q9WTL7 231 aa16.03■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ripor3A1L3T7 938 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ppp1r9aH3BJD6 1292 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Mmp10O55123 476 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Mpp3O88910 568 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Pla2g4bP0C871 782 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Parp1P11103 1013 aaKnown RBP16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Adssl1P28650 457 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Hoxa11P31311 313 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Paxbp1P58501 919 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Xxylt1Q3U4G3 392 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Recql4Q75NR7 1216 aaKnown RBP16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Etf1Q8BWY3 437 aaKnown RBP16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Epc2Q8C0I4 808 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ces1Q8VCC2 565 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Tdrd3Q91W18 743 aaKnown RBP16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 BaatQ91X34 420 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 SerhlQ9EPB5 311 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Tfr2Q9JKX3 798 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Pex3Q9QXY9 372 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 IkQ9Z1M8 557 aaKnown RBP16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ccdc88cQ6VGS5 2009 aa16.02■□□□□ 0.16
Ssr1-204ENSMUST00000225319 Ccdc191J3QQ27 883 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Cbx1P83917 185 aaKnown RBP16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Specc1lQ2KN98 1118 aaKnown RBP16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Q3UJP5 209 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Rbm12b2Q66JV4 834 aaKnown RBP16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 RragbQ6NTA4 374 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Frat2Q8K025 231 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Cabp7Q91ZM8 215 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Gnl2Q99LH1 728 aaKnown RBP16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 PdhbQ9D051 359 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Q9DAQ4 598 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sertad1Q9JL10 236 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Dnajc25A2ALW5 357 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Herc3A6H6S0 1050 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Pcdh11xF6ZNL5 1338 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 AoahO35298 574 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Pcdha4O88689 947 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 L1td1Q587J6 782 aaKnown RBP16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sun3Q5SS91 320 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ift88Q61371 824 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Aggf1Q7TN31 711 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Bri3bpQ8BXV2 253 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ifih1Q8R5F7 1025 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sgip1Q8VD37 806 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 DaglbQ91WC9 669 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Vta1Q9CR26 309 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Cmtm5Q9D6G9 156 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sapcd2Q9D818 391 aa16.01■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Mms22lB1AUR6 1238 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Map4k1P70218 827 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Gabpb2P81069 414 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Pls1Q3V0K9 630 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Bag1Q60739 355 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sp4Q62445 782 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Eif3j2Q66JS6 263 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Sval3Q76I99 144 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Caps2Q8BUG5 550 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Arhgef19Q8BWA8 802 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ppp1r3gQ9CW07 347 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Serpinb3bQ9D1Q5 387 aa16■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ess2O70279 479 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 EmbP21995 330 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Samsn1P57725 372 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Hoxa13Q62424 386 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Senp5Q6NXL6 749 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ddx41Q91VN6 622 aaKnown RBP15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Tmx2Q9D710 295 aaKnown RBP15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Zkscan5Q9Z1D8 819 aa15.99■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Cul4bA2A432 970 aaKnown RBP15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Mroh8E9PYI4 1049 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Ankrd35E9Q9D8 996 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Zc3h7bF8VPP8 982 aaKnown RBP15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Esr2O08537 530 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Diaph1O08808 1255 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Flot1O08917 428 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Nfatc2ipO09130 412 aa15.98■□□□□ 0.15
Ssr1-204ENSMUST00000225319 Brd9Q3UQU0 596 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms