RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Dph6Q9CQ28 267 aa10.64□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Nedd4P46935 887 aaKnown RBP10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ddx19bQ8BZY3 494 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 CnstQ8CBC4 711 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 AacsQ9D2R0 672 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Serpinb12Q9D7P9 423 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Itga2bQ9QUM0 1033 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Pitpnm2Q6ZPQ6 1335 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Nom1Q3UFM5 854 aaKnown RBP10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cacna2d4Q5RJF7 1116 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Herc4Q6PAV2 1057 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Olfr832Q7TRG9 312 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Arhgef19Q8BWA8 802 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 CsadQ9DBE0 493 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm45140A0A0N4SUM8 220 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lekr1B2RVN1 116 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ankrd35E9Q9D8 996 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Dnajb6O54946 365 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gng11P61953 73 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Foxn3Q499D0 457 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zfp341Q6PGC9 846 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cc2d1bQ8BRN9 848 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ccdc113Q8C5T8 377 aa10.63□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 GpiP06745 558 aaKnown RBP10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Adck2Q6NSR3 617 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Morc2bQ8C5W4 1022 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tmem63cQ8CBX0 802 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lman1lQ8VCD3 505 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Atp5c1Q91VR2 298 aaKnown RBP10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cabp5Q9JLK3 173 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zfp831A2ADM8 1628 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm1993A6X8I0 212 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 SlxD3Z347 212 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Klrk1O54709 232 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Kcnj11Q61743 390 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Frat2Q8K025 231 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Trappc12Q8K2L8 797 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Appl2Q8K3G9 662 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tmem134Q8R0J4 195 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm38392E9Q2A2 434 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cnnm4Q69ZF7 771 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Kif17Q99PW8 1038 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Fam205a1D3YZF6 1314 aa10.62□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Pdrg1P59048 133 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Wdr70Q3TWF6 657 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Klrg2Q3UM83 387 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lgr6Q3UVD5 967 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Krt14Q61781 484 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ppp2r2cQ8BG02 447 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Kbtbd4Q8R179 534 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Taf6lQ8R2K4 616 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 BaatQ91X34 420 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Dnajc19Q9CQV7 116 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 NkapQ9D0F4 415 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Cmtm5Q9D6G9 156 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Slc26a4Q9R155 780 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm7168A0AUV4 508 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 C87977A2A958 498 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zc3h7bF8VPP8 982 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Wnt10bP48614 389 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zfp781Q0P5U5 243 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ccdc102aQ3TMW1 549 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gucy2cQ3UWA6 1072 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 L1td1Q587J6 782 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Dpf2Q61103 391 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Trim25Q61510 634 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Eif3j2Q66JS6 263 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 PicalmQ7M6Y3 660 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gprasp2Q8BUY8 826 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Zhx2Q8C0C0 836 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Lrrc41Q8K1C9 807 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ccdc43Q9CR29 222 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Klhl40Q9D783 621 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Git2Q9JLQ2 708 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ms4a1P19437 291 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Stat3P42227 770 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tfcp2l1Q3UNW5 479 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Psg29Q3URN6 468 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ddx10Q80Y44 875 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Kcnv2Q8CFS6 562 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Psmd2Q8VDM4 908 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Rbm42Q91V81 474 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tdrd3Q91W18 743 aaKnown RBP10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Mss51Q9D5Z5 446 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Elf2Q9JHC9 593 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Usp21Q9QZL6 566 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 D830030K20RikE9PYQ5 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm3043K7N693 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm16440K7N6G6 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm2244L7N2A3 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm3278L7N2D2 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm8271L7N2E2 218 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Olfr121Q5CZY0 321 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Bhmt2Q91WS4 363 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Snapc2Q91XA5 359 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Tgs1Q923W1 853 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Abcb6Q9DC29 842 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ulk4Q3V129 1303 aa10.61□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Gm5580A0A0N4SVP8 411 aa10.6□□□□□ -0.71
Sh3rf1-202ENSMUST00000209611 Ric8aQ3TIR3 530 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms