RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Magea3Q6T340 320 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Brd2Q7JJ13 798 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Olfr832Q7TRG9 312 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Camsap3Q80VC9 1252 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ppp2r2cQ8BG02 447 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Necab1Q8BG18 352 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Zhx2Q8C0C0 836 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Lman1lQ8VCD3 505 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Krt79Q8VED5 531 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Havcr2Q8VIM0 281 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tdrd3Q91W18 743 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Pcdha7Q91Y13 937 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 MymkQ9D1N4 221 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ddx23D3Z0M9 819 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ankrd35E9Q9D8 996 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 GpiP06745 558 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Olfr121Q5CZY0 321 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Igf2bp2Q5SF07 592 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Etf1Q8BWY3 437 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 NapaQ9DB05 295 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tfr2Q9JKX3 798 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Slc26a4Q9R155 780 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Cyp2c69E9PXC3 491 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Mpp3O88910 568 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Cyp2c40P56657 491 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Setd4P58467 439 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Nlrp2Q4PLS0 1046 aaKnown RBP17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Smarca1Q6PGB8 1046 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Nek9Q8K1R7 984 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Kremen1Q99N43 473 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Xxylt1Q3U4G3 392 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Zfp953Q3UPV7 304 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tom1l2Q5SRX1 507 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Zfp341Q6PGC9 846 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Apol10aQ8CCA5 318 aa17.75■□□□□ 0.43
Trim39-203ENSMUST00000113706 Pcdha4O88689 947 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Oog3Q3UWY1 500 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Foxn3Q499D0 457 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Bpifb4A2BGH0 617 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Pagr1bF6V0H0 108 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 CatspereP0DP43 985 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Hoxa11P31311 313 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tmprss11eQ5S248 423 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Churc1Q6DG52 112 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Kbtbd4Q8R179 534 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Pagr1aQ99L02 253 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Cmtm5Q9D6G9 156 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 CsadQ9DBE0 493 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Vstm4T1NXB5 319 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Zc3h7bF8VPP8 982 aaKnown RBP17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 FosP01101 380 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Parp1P11103 1013 aaKnown RBP17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Stat3P42227 770 aaKnown RBP17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Gucy2cQ3UWA6 1072 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Lrrfip1Q3UZ39 729 aaKnown RBP17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Sp4Q62445 782 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Fkbp3Q62446 224 aaKnown RBP17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Morc2bQ8C5W4 1022 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Abhd2Q9QXM0 425 aa17.74■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ttc6G3UYY4 1857 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ric8aQ3TIR3 530 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Bag1Q60739 355 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Thap3Q8BJ25 218 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Yars2Q8BYL4 472 aaKnown RBP17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Slc18a1Q8R090 521 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Defb15Q8R2I5 79 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Usp31E9Q6Y8 1344 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Mroh8E9PYI4 1049 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Dnajb6O54946 365 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Gm11437Q5QR91 290 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Sap130Q8BIH0 1057 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Igdcc3Q8BQC3 813 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 Desi2Q9D291 194 aa17.73■□□□□ 0.43
Trim39-203ENSMUST00000113706 XdhQ00519 1335 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Fgfr2P21803 821 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tpm1P58771 284 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 NyxP83503 476 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ssrp1Q08943 708 aaKnown RBP17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Slc2a13Q3UHK1 637 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Stim1P70302 685 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Lrrc36Q3V0M2 755 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Rgl1Q60695 768 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Trpc6Q61143 930 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Gprasp2Q8BUY8 826 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 HyiQ8R1F5 277 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tor1aip1Q921T2 595 aaKnown RBP17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 SelenooQ9DBC0 667 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 C87977A2A958 498 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Kdm1aQ6ZQ88 853 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Fbxo10Q7TQF2 950 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Gjd4Q8BSD4 364 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tmem63cQ8CBX0 802 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tmem134Q8R0J4 195 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Arhgef25Q9CWR0 618 aa17.72■□□□□ 0.43
Trim39-203ENSMUST00000113706 Man1a2P39098 641 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 KhsrpQ3U0V1 748 aaKnown RBP17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Phf20Q8BLG0 1010 aaKnown RBP17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tdrd1Q99MV1 1172 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Vps33aQ9D2N9 598 aa17.71■□□□□ 0.43
Trim39-203ENSMUST00000113706 Mfap3lQ9D3X9 409 aa17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms