RNA–Protein interactions for RNA: ENST00000642077.1

CASC19-276, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 993 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-276ENST00000642077 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
CASC19-276ENST00000642077 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
CASC19-276ENST00000642077 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
CASC19-276ENST00000642077 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
CASC19-276ENST00000642077 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
CASC19-276ENST00000642077 RGL2O15211 777 aa14.09□□□□□ -0.15
CASC19-276ENST00000642077 FBXO22Q8NEZ5 403 aa14.06□□□□□ -0.16
CASC19-276ENST00000642077 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
CASC19-276ENST00000642077 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
CASC19-276ENST00000642077 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CASC19-276ENST00000642077 NLRP6P59044 892 aa14.02□□□□□ -0.17
CASC19-276ENST00000642077 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
CASC19-276ENST00000642077 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
CASC19-276ENST00000642077 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CASC19-276ENST00000642077 RIMBP2O15034 1052 aa14□□□□□ -0.17
CASC19-276ENST00000642077 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
CASC19-276ENST00000642077 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
CASC19-276ENST00000642077 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CASC19-276ENST00000642077 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
CASC19-276ENST00000642077 ERBB3P21860 1342 aa13.94□□□□□ -0.18
CASC19-276ENST00000642077 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
CASC19-276ENST00000642077 STK25O00506 426 aa13.93□□□□□ -0.18
CASC19-276ENST00000642077 KIF3CO14782 793 aa13.88□□□□□ -0.19
CASC19-276ENST00000642077 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
CASC19-276ENST00000642077 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
CASC19-276ENST00000642077 HS6ST3Q8IZP7 471 aa13.85□□□□□ -0.19
CASC19-276ENST00000642077 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
CASC19-276ENST00000642077 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CASC19-276ENST00000642077 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
CASC19-276ENST00000642077 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CASC19-276ENST00000642077 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
CASC19-276ENST00000642077 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
CASC19-276ENST00000642077 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
CASC19-276ENST00000642077 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
CASC19-276ENST00000642077 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■□□□□ 9.6
CASC19-276ENST00000642077 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CASC19-276ENST00000642077 SLC34A2O95436 690 aa13.73□□□□□ -0.21
CASC19-276ENST00000642077 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
CASC19-276ENST00000642077 PPP1R37O75864 691 aa13.69□□□□□ -0.22
CASC19-276ENST00000642077 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
CASC19-276ENST00000642077 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
CASC19-276ENST00000642077 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
CASC19-276ENST00000642077 PTGER2P43116 358 aa13.64□□□□□ -0.23
CASC19-276ENST00000642077 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
CASC19-276ENST00000642077 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CASC19-276ENST00000642077 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CASC19-276ENST00000642077 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
CASC19-276ENST00000642077 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
CASC19-276ENST00000642077 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CASC19-276ENST00000642077 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
CASC19-276ENST00000642077 RYDENQ9NUL5 291 aaKnown RBP13.58□□□□□ -0.24
CASC19-276ENST00000642077 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CASC19-276ENST00000642077 PBX2P40425 430 aa13.57□□□□□ -0.24
CASC19-276ENST00000642077 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CASC19-276ENST00000642077 NACADO15069 1562 aa13.55□□□□□ -0.24
CASC19-276ENST00000642077 FOXK1P85037 733 aa13.55□□□□□ -0.24
CASC19-276ENST00000642077 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CASC19-276ENST00000642077 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASC19-276ENST00000642077 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
CASC19-276ENST00000642077 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CASC19-276ENST00000642077 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
CASC19-276ENST00000642077 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CASC19-276ENST00000642077 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CASC19-276ENST00000642077 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CASC19-276ENST00000642077 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CASC19-276ENST00000642077 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
CASC19-276ENST00000642077 ABCC9O60706 1549 aa13.43□□□□□ -0.26
CASC19-276ENST00000642077 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
CASC19-276ENST00000642077 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
CASC19-276ENST00000642077 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
CASC19-276ENST00000642077 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
CASC19-276ENST00000642077 TK2O00142 265 aa13.34□□□□□ -0.27
CASC19-276ENST00000642077 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CASC19-276ENST00000642077 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CASC19-276ENST00000642077 HRO43593 1189 aa13.32□□□□□ -0.28
CASC19-276ENST00000642077 BCANQ96GW7 911 aa13.32□□□□□ -0.28
CASC19-276ENST00000642077 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CASC19-276ENST00000642077 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CASC19-276ENST00000642077 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CASC19-276ENST00000642077 PSEN2P49810 448 aa13.29□□□□□ -0.28
CASC19-276ENST00000642077 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CASC19-276ENST00000642077 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CASC19-276ENST00000642077 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CASC19-276ENST00000642077 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC19-276ENST00000642077 PDE4AP27815 886 aa13.2□□□□□ -0.3
CASC19-276ENST00000642077 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
CASC19-276ENST00000642077 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
CASC19-276ENST00000642077 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
CASC19-276ENST00000642077 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CASC19-276ENST00000642077 FOSBP53539 338 aa13.17□□□□□ -0.3
CASC19-276ENST00000642077 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CASC19-276ENST00000642077 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CASC19-276ENST00000642077 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CASC19-276ENST00000642077 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
CASC19-276ENST00000642077 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
CASC19-276ENST00000642077 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
CASC19-276ENST00000642077 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
CASC19-276ENST00000642077 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CASC19-276ENST00000642077 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CASC19-276ENST00000642077 EVI5O60447 810 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms