RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
CASC19-260ENST00000641828 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
CASC19-260ENST00000641828 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
CASC19-260ENST00000641828 ARXQ96QS3 562 aa9.1□□□□□ -0.95
CASC19-260ENST00000641828 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
CASC19-260ENST00000641828 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
CASC19-260ENST00000641828 MAP3K13O43283 966 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
CASC19-260ENST00000641828 ATAD2BQ9ULI0 1458 aa9.07□□□□□ -0.96
CASC19-260ENST00000641828 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
CASC19-260ENST00000641828 KIF12Q96FN5 646 aa9.06□□□□□ -0.96
CASC19-260ENST00000641828 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
CASC19-260ENST00000641828 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
CASC19-260ENST00000641828 PDE4AP27815 886 aa9.04□□□□□ -0.96
CASC19-260ENST00000641828 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
CASC19-260ENST00000641828 WDR62O43379 1518 aa9.03□□□□□ -0.96
CASC19-260ENST00000641828 ZMYND10O75800 440 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.97
CASC19-260ENST00000641828 MFSD10Q14728 455 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 CENPBP07199 599 aaPredicted RBP9.02□□□□□ -0.97
CASC19-260ENST00000641828 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
CASC19-260ENST00000641828 CRISPLD2Q9H0B8 497 aa9□□□□□ -0.97
CASC19-260ENST00000641828 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
CASC19-260ENST00000641828 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
CASC19-260ENST00000641828 BAZ1BQ9UIG0 1483 aaKnown RBP8.98□□□□□ -0.97
CASC19-260ENST00000641828 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
CASC19-260ENST00000641828 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
CASC19-260ENST00000641828 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
CASC19-260ENST00000641828 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
CASC19-260ENST00000641828 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
CASC19-260ENST00000641828 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
CASC19-260ENST00000641828 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
CASC19-260ENST00000641828 RBM26Q5T8P6 1007 aaKnown RBP8.9□□□□□ -0.98
CASC19-260ENST00000641828 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 AK7Q96M32 723 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
CASC19-260ENST00000641828 CEP164Q9UPV0 1460 aa8.89□□□□□ -0.99
CASC19-260ENST00000641828 CADPSQ9ULU8 1353 aa8.89□□□□□ -0.99
CASC19-260ENST00000641828 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
CASC19-260ENST00000641828 MKRN3Q13064 507 aaKnown RBP8.88□□□□□ -0.99
CASC19-260ENST00000641828 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
CASC19-260ENST00000641828 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 DAXXQ9UER7 740 aaPredicted RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
CASC19-260ENST00000641828 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
CASC19-260ENST00000641828 GPHNQ9NQX3 736 aaPredicted RBP8.85□□□□□ -0.99
CASC19-260ENST00000641828 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
CASC19-260ENST00000641828 DPYSL4O14531 572 aa8.82□□□□□ -1
CASC19-260ENST00000641828 MS4A3Q96HJ5 214 aa8.82□□□□□ -1
CASC19-260ENST00000641828 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
CASC19-260ENST00000641828 CHD1O14646 1710 aa8.81□□□□□ -1
CASC19-260ENST00000641828 IL27Q8NEV9 243 aa8.81□□□□□ -1
CASC19-260ENST00000641828 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
CASC19-260ENST00000641828 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
CASC19-260ENST00000641828 PDIA6Q15084 440 aa8.8□□□□□ -1
CASC19-260ENST00000641828 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
CASC19-260ENST00000641828 TRIM66O15016 1216 aa8.8□□□□□ -1
CASC19-260ENST00000641828 BCL11AQ9H165 835 aa8.8□□□□□ -1
CASC19-260ENST00000641828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -17e-8■□□□□ 10.2
CASC19-260ENST00000641828 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
CASC19-260ENST00000641828 PDE4DQ08499 809 aa8.79□□□□□ -1
CASC19-260ENST00000641828 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
CASC19-260ENST00000641828 DSG2Q14126 1118 aa8.78□□□□□ -1
CASC19-260ENST00000641828 TIE1P35590 1138 aa8.77□□□□□ -1.01
CASC19-260ENST00000641828 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
CASC19-260ENST00000641828 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
CASC19-260ENST00000641828 URB2Q14146 1524 aaKnown RBP8.76□□□□□ -1.01
CASC19-260ENST00000641828 GPR37O15354 613 aa8.74□□□□□ -1.01
CASC19-260ENST00000641828 FOXK1P85037 733 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
CASC19-260ENST00000641828 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
CASC19-260ENST00000641828 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.01
CASC19-260ENST00000641828 ZMYND15Q9H091 742 aa8.71□□□□□ -1.01
CASC19-260ENST00000641828 BMP2KQ9NSY1 1161 aaPredicted RBP8.71□□□□□ -1.01
CASC19-260ENST00000641828 TRIM35Q9UPQ4 493 aa8.71□□□□□ -1.02
CASC19-260ENST00000641828 KDM4FA0A1W2PPD8 638 aa8.7□□□□□ -1.02
CASC19-260ENST00000641828 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
CASC19-260ENST00000641828 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
CASC19-260ENST00000641828 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
CASC19-260ENST00000641828 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
CASC19-260ENST00000641828 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
CASC19-260ENST00000641828 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 GRXCR2A6NFK2 248 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms