RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
CASC19-260ENST00000641828 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
CASC19-260ENST00000641828 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
CASC19-260ENST00000641828 ARXQ96QS3 562 aa9.1□□□□□ -0.95
CASC19-260ENST00000641828 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
CASC19-260ENST00000641828 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
CASC19-260ENST00000641828 MAP3K13O43283 966 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
CASC19-260ENST00000641828 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
CASC19-260ENST00000641828 ATAD2BQ9ULI0 1458 aa9.07□□□□□ -0.96
CASC19-260ENST00000641828 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
CASC19-260ENST00000641828 KIF12Q96FN5 646 aa9.06□□□□□ -0.96
CASC19-260ENST00000641828 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
CASC19-260ENST00000641828 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
CASC19-260ENST00000641828 PDE4AP27815 886 aa9.04□□□□□ -0.96
CASC19-260ENST00000641828 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
CASC19-260ENST00000641828 WDR62O43379 1518 aa9.03□□□□□ -0.96
CASC19-260ENST00000641828 ZMYND10O75800 440 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.97
CASC19-260ENST00000641828 MFSD10Q14728 455 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 CENPBP07199 599 aaPredicted RBP9.02□□□□□ -0.97
CASC19-260ENST00000641828 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
CASC19-260ENST00000641828 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
CASC19-260ENST00000641828 CRISPLD2Q9H0B8 497 aa9□□□□□ -0.97
CASC19-260ENST00000641828 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
CASC19-260ENST00000641828 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
CASC19-260ENST00000641828 BAZ1BQ9UIG0 1483 aaKnown RBP8.98□□□□□ -0.97
CASC19-260ENST00000641828 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
CASC19-260ENST00000641828 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
CASC19-260ENST00000641828 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
CASC19-260ENST00000641828 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
CASC19-260ENST00000641828 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
CASC19-260ENST00000641828 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
CASC19-260ENST00000641828 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
CASC19-260ENST00000641828 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
CASC19-260ENST00000641828 RBM26Q5T8P6 1007 aaKnown RBP8.9□□□□□ -0.98
CASC19-260ENST00000641828 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 AK7Q96M32 723 aa8.9□□□□□ -0.99
CASC19-260ENST00000641828 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
CASC19-260ENST00000641828 CEP164Q9UPV0 1460 aa8.89□□□□□ -0.99
CASC19-260ENST00000641828 CADPSQ9ULU8 1353 aa8.89□□□□□ -0.99
CASC19-260ENST00000641828 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
CASC19-260ENST00000641828 MKRN3Q13064 507 aaKnown RBP8.88□□□□□ -0.99
CASC19-260ENST00000641828 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
CASC19-260ENST00000641828 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 DAXXQ9UER7 740 aaPredicted RBP8.87□□□□□ -0.99
CASC19-260ENST00000641828 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
CASC19-260ENST00000641828 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
CASC19-260ENST00000641828 GPHNQ9NQX3 736 aaPredicted RBP8.85□□□□□ -0.99
CASC19-260ENST00000641828 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
CASC19-260ENST00000641828 DPYSL4O14531 572 aa8.82□□□□□ -1
CASC19-260ENST00000641828 MS4A3Q96HJ5 214 aa8.82□□□□□ -1
CASC19-260ENST00000641828 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
CASC19-260ENST00000641828 CHD1O14646 1710 aa8.81□□□□□ -1
CASC19-260ENST00000641828 IL27Q8NEV9 243 aa8.81□□□□□ -1
CASC19-260ENST00000641828 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
CASC19-260ENST00000641828 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
CASC19-260ENST00000641828 PDIA6Q15084 440 aa8.8□□□□□ -1
CASC19-260ENST00000641828 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
CASC19-260ENST00000641828 TRIM66O15016 1216 aa8.8□□□□□ -1
CASC19-260ENST00000641828 BCL11AQ9H165 835 aa8.8□□□□□ -1
CASC19-260ENST00000641828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -17e-8■□□□□ 10.2
CASC19-260ENST00000641828 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
CASC19-260ENST00000641828 PDE4DQ08499 809 aa8.79□□□□□ -1
CASC19-260ENST00000641828 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
CASC19-260ENST00000641828 DSG2Q14126 1118 aa8.78□□□□□ -1
CASC19-260ENST00000641828 TIE1P35590 1138 aa8.77□□□□□ -1.01
CASC19-260ENST00000641828 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
CASC19-260ENST00000641828 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
CASC19-260ENST00000641828 URB2Q14146 1524 aaKnown RBP8.76□□□□□ -1.01
CASC19-260ENST00000641828 GPR37O15354 613 aa8.74□□□□□ -1.01
CASC19-260ENST00000641828 FOXK1P85037 733 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
CASC19-260ENST00000641828 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
CASC19-260ENST00000641828 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
CASC19-260ENST00000641828 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.01
CASC19-260ENST00000641828 ZMYND15Q9H091 742 aa8.71□□□□□ -1.01
CASC19-260ENST00000641828 BMP2KQ9NSY1 1161 aaPredicted RBP8.71□□□□□ -1.01
CASC19-260ENST00000641828 TRIM35Q9UPQ4 493 aa8.71□□□□□ -1.02
CASC19-260ENST00000641828 KDM4FA0A1W2PPD8 638 aa8.7□□□□□ -1.02
CASC19-260ENST00000641828 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
CASC19-260ENST00000641828 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
CASC19-260ENST00000641828 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
CASC19-260ENST00000641828 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
CASC19-260ENST00000641828 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
CASC19-260ENST00000641828 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 GRXCR2A6NFK2 248 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
CASC19-260ENST00000641828 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms