RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
PRICKLE1-220ENST00000640840 SUPT6HQ7KZ85 1726 aaKnown RBP9.18□□□□□ -0.94
PRICKLE1-220ENST00000640840 LRRC9Q6ZRR7 1453 aa9.17□□□□□ -0.94
PRICKLE1-220ENST00000640840 FANCAO15360 1455 aa9.16□□□□□ -0.94
PRICKLE1-220ENST00000640840 SAMD9LQ8IVG5 1584 aa9.16□□□□□ -0.94
PRICKLE1-220ENST00000640840 GPATCH8Q9UKJ3 1502 aaKnown RBP9.16□□□□□ -0.94
PRICKLE1-220ENST00000640840 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
PRICKLE1-220ENST00000640840 KDM5CP41229 1560 aa9.15□□□□□ -0.94
PRICKLE1-220ENST00000640840 ABCC1P33527 1531 aa9.15□□□□□ -0.94
PRICKLE1-220ENST00000640840 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
PRICKLE1-220ENST00000640840 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
PRICKLE1-220ENST00000640840 SIGLEC1Q9BZZ2 1709 aa9.13□□□□□ -0.95
PRICKLE1-220ENST00000640840 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
PRICKLE1-220ENST00000640840 NCOA2Q15596 1464 aa9.12□□□□□ -0.95
PRICKLE1-220ENST00000640840 POGZQ7Z3K3 1410 aa9.12□□□□□ -0.95
PRICKLE1-220ENST00000640840 ARHGAP5Q13017 1502 aa9.11□□□□□ -0.95
PRICKLE1-220ENST00000640840 ARHGEF40Q8TER5 1519 aa9.11□□□□□ -0.95
PRICKLE1-220ENST00000640840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
PRICKLE1-220ENST00000640840 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
PRICKLE1-220ENST00000640840 ADGRL1O94910 1474 aa9.1□□□□□ -0.95
PRICKLE1-220ENST00000640840 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
PRICKLE1-220ENST00000640840 INO80Q9ULG1 1556 aaPredicted RBP9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 DENND4BO75064 1496 aaPredicted RBP9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 KIDINS220Q9ULH0 1771 aa9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 MAGI2Q86UL8 1455 aa9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 MTUS2Q5JR59 1369 aa9.09□□□□□ -0.95
PRICKLE1-220ENST00000640840 ATP1B4Q9UN42 357 aaPredicted RBP9.08□□□□□ -0.96
PRICKLE1-220ENST00000640840 MBD5Q9P267 1494 aa9.08□□□□□ -0.96
PRICKLE1-220ENST00000640840 HECW2Q9P2P5 1572 aa9.08□□□□□ -0.96
PRICKLE1-220ENST00000640840 ARHGEF5Q12774 1597 aa9.08□□□□□ -0.96
PRICKLE1-220ENST00000640840 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
PRICKLE1-220ENST00000640840 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 ABCA6Q8N139 1617 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 SYCP2Q9BX26 1530 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 ZNF518AQ6AHZ1 1483 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 MLH3Q9UHC1 1453 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 APLP2Q06481 763 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 DIP2CQ9Y2E4 1556 aa9.07□□□□□ -0.96
PRICKLE1-220ENST00000640840 PLEKHH2Q8IVE3 1493 aa9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 SCAPERQ9BY12 1400 aa9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 MAST1Q9Y2H9 1570 aa9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 ZFYVE16Q7Z3T8 1539 aa9.06□□□□□ -0.96
PRICKLE1-220ENST00000640840 CAMSAP2Q08AD1 1489 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 BCORL1Q5H9F3 1711 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 ADAMTSL3P82987 1691 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 ADGBQ8N7X0 1667 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 PLXNC1O60486 1568 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 AEBP2Q6ZN18 517 aaPredicted RBP9.05□□□□□ -0.96
PRICKLE1-220ENST00000640840 PTPN23Q9H3S7 1636 aa9.04□□□□□ -0.96
PRICKLE1-220ENST00000640840 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
PRICKLE1-220ENST00000640840 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
PRICKLE1-220ENST00000640840 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.97
PRICKLE1-220ENST00000640840 ATP7AQ04656 1500 aa9.02□□□□□ -0.97
PRICKLE1-220ENST00000640840 AGLP35573 1532 aa9.01□□□□□ -0.97
PRICKLE1-220ENST00000640840 RTEL1-TNFRSF6BF6WH68 1400 aa9.01□□□□□ -0.97
PRICKLE1-220ENST00000640840 ATP10AO60312 1499 aa9□□□□□ -0.97
PRICKLE1-220ENST00000640840 FGD6Q6ZV73 1430 aa9□□□□□ -0.97
PRICKLE1-220ENST00000640840 CCDC141Q6ZP82 1450 aa8.99□□□□□ -0.97
PRICKLE1-220ENST00000640840 SHANK2Q9UPX8 1470 aa8.99□□□□□ -0.97
PRICKLE1-220ENST00000640840 C9orf84Q5VXU9 1444 aa8.99□□□□□ -0.97
PRICKLE1-220ENST00000640840 ZNF644Q9H582 1327 aaPredicted RBP8.99□□□□□ -0.97
PRICKLE1-220ENST00000640840 CFDP1Q9UEE9 299 aaPredicted RBP8.98□□□□□ -0.97
PRICKLE1-220ENST00000640840 AFAP1Q8N556 730 aa8.97□□□□□ -0.97
PRICKLE1-220ENST00000640840 EIF2AK4Q9P2K8 1649 aaKnown RBP8.97□□□□□ -0.97
PRICKLE1-220ENST00000640840 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.97
PRICKLE1-220ENST00000640840 MADDQ8WXG6 1647 aa8.96□□□□□ -0.97
PRICKLE1-220ENST00000640840 FER1L4A9Z1Z3 1794 aa8.96□□□□□ -0.97
PRICKLE1-220ENST00000640840 RNF17Q9BXT8 1623 aaKnown RBP8.96□□□□□ -0.98
PRICKLE1-220ENST00000640840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.96□□□□□ -0.98
PRICKLE1-220ENST00000640840 MROH2AA6NES4 1674 aa8.95□□□□□ -0.98
PRICKLE1-220ENST00000640840 ABCC5O15440 1437 aa8.95□□□□□ -0.98
PRICKLE1-220ENST00000640840 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.98
PRICKLE1-220ENST00000640840 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
PRICKLE1-220ENST00000640840 DEPDC5O75140 1603 aa8.95□□□□□ -0.98
PRICKLE1-220ENST00000640840 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
PRICKLE1-220ENST00000640840 DAPK1P53355 1430 aa8.94□□□□□ -0.98
PRICKLE1-220ENST00000640840 RRBP1Q9P2E9 1410 aaKnown RBP8.94□□□□□ -0.98
PRICKLE1-220ENST00000640840 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
PRICKLE1-220ENST00000640840 FAM135AQ9P2D6 1515 aa8.93□□□□□ -0.98
PRICKLE1-220ENST00000640840 A2MP01023 1474 aa8.93□□□□□ -0.98
PRICKLE1-220ENST00000640840 RIMS1Q86UR5 1692 aaKnown RBP8.93□□□□□ -0.98
PRICKLE1-220ENST00000640840 C3P01024 1663 aa8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 SPAG9O60271 1321 aaKnown RBP8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 PTPRKQ15262 1439 aa8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 DUOX2Q9NRD8 1548 aa8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 ZC3H13Q5T200 1668 aaKnown RBP8.91□□□□□ -0.98
PRICKLE1-220ENST00000640840 DHX29Q7Z478 1369 aaKnown RBP8.9□□□□□ -0.98
PRICKLE1-220ENST00000640840 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
PRICKLE1-220ENST00000640840 VWDEQ8N2E2 1590 aa8.9□□□□□ -0.99
PRICKLE1-220ENST00000640840 KDM5DQ9BY66 1539 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms