RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 POTEB3A0JP26 581 aa8.61□□□□□ -1.03
ATM-230ENST00000640388 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
ATM-230ENST00000640388 POTEBQ6S5H4 581 aa8.61□□□□□ -1.03
ATM-230ENST00000640388 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
ATM-230ENST00000640388 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
ATM-230ENST00000640388 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
ATM-230ENST00000640388 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
ATM-230ENST00000640388 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
ATM-230ENST00000640388 PHF8Q9UPP1 1060 aa8.6□□□□□ -1.03
ATM-230ENST00000640388 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
ATM-230ENST00000640388 TMEM92Q6UXU6 159 aa8.59□□□□□ -1.03
ATM-230ENST00000640388 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
ATM-230ENST00000640388 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
ATM-230ENST00000640388 NLRP6P59044 892 aa8.58□□□□□ -1.04
ATM-230ENST00000640388 RIMBP2O15034 1052 aa8.57□□□□□ -1.04
ATM-230ENST00000640388 ZNF710Q8N1W2 664 aa8.57□□□□□ -1.04
ATM-230ENST00000640388 FBXO22Q8NEZ5 403 aa8.57□□□□□ -1.04
ATM-230ENST00000640388 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.57□□□□□ -1.04
ATM-230ENST00000640388 GTPBP6O43824 516 aaPredicted RBP8.52□□□□□ -1.05
ATM-230ENST00000640388 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
ATM-230ENST00000640388 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
ATM-230ENST00000640388 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
ATM-230ENST00000640388 SPRYD3Q8NCJ5 442 aa8.5□□□□□ -1.05
ATM-230ENST00000640388 CFAP44Q96MT7 982 aa8.5□□□□□ -1.05
ATM-230ENST00000640388 ERBB3P21860 1342 aa8.5□□□□□ -1.05
ATM-230ENST00000640388 PPP1R37O75864 691 aa8.48□□□□□ -1.05
ATM-230ENST00000640388 KIF3CO14782 793 aa8.47□□□□□ -1.05
ATM-230ENST00000640388 ZNF687Q8N1G0 1237 aa8.45□□□□□ -1.06
ATM-230ENST00000640388 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
ATM-230ENST00000640388 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
ATM-230ENST00000640388 SLC34A2O95436 690 aa8.4□□□□□ -1.06
ATM-230ENST00000640388 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
ATM-230ENST00000640388 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
ATM-230ENST00000640388 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
ATM-230ENST00000640388 PTGER2P43116 358 aa8.38□□□□□ -1.07
ATM-230ENST00000640388 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
ATM-230ENST00000640388 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■■■□□ 15
ATM-230ENST00000640388 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
ATM-230ENST00000640388 PBX2P40425 430 aa8.32□□□□□ -1.08
ATM-230ENST00000640388 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
ATM-230ENST00000640388 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
ATM-230ENST00000640388 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
ATM-230ENST00000640388 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
ATM-230ENST00000640388 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
ATM-230ENST00000640388 NUDT7P0C024 238 aa8.29□□□□□ -1.08
ATM-230ENST00000640388 KDM4FA0A1W2PPD8 638 aa8.28□□□□□ -1.08
ATM-230ENST00000640388 PDE4AP27815 886 aa8.28□□□□□ -1.08
ATM-230ENST00000640388 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATM-230ENST00000640388 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
ATM-230ENST00000640388 FOXK1P85037 733 aa8.27□□□□□ -1.09
ATM-230ENST00000640388 PTCD2Q8WV60 388 aaKnown RBP8.27□□□□□ -1.09
ATM-230ENST00000640388 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
ATM-230ENST00000640388 PSDA5PKW4 1024 aaPredicted RBP8.26□□□□□ -1.09
ATM-230ENST00000640388 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
ATM-230ENST00000640388 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
ATM-230ENST00000640388 LHX6Q9UPM6 363 aa8.26□□□□□ -1.09
ATM-230ENST00000640388 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
ATM-230ENST00000640388 DSG2Q14126 1118 aa8.23□□□□□ -1.09
ATM-230ENST00000640388 ANKRD13DQ6ZTN6 518 aa8.22□□□□□ -1.09
ATM-230ENST00000640388 DDX27Q96GQ7 796 aaKnown RBP8.22□□□□□ -1.09
ATM-230ENST00000640388 PLPP6Q8IY26 295 aa8.21□□□□□ -1.1
ATM-230ENST00000640388 PPP1R15BQ5SWA1 713 aa8.2□□□□□ -1.1
ATM-230ENST00000640388 WDR70Q9NW82 654 aa8.2□□□□□ -1.1
ATM-230ENST00000640388 MFSD10Q14728 455 aa8.19□□□□□ -1.1
ATM-230ENST00000640388 ARHGAP33O14559 1287 aa8.18□□□□□ -1.1
ATM-230ENST00000640388 TK2O00142 265 aa8.17□□□□□ -1.1
ATM-230ENST00000640388 KDM2AQ9Y2K7 1162 aa8.16□□□□□ -1.1
ATM-230ENST00000640388 TBC1D12O60347 775 aa8.15□□□□□ -1.1
ATM-230ENST00000640388 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
ATM-230ENST00000640388 AXIN2Q9Y2T1 843 aa8.15□□□□□ -1.1
ATM-230ENST00000640388 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
ATM-230ENST00000640388 OXER1Q8TDS5 423 aa8.14□□□□□ -1.11
ATM-230ENST00000640388 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
ATM-230ENST00000640388 HRO43593 1189 aa8.12□□□□□ -1.11
ATM-230ENST00000640388 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
ATM-230ENST00000640388 E2F4Q16254 413 aa8.12□□□□□ -1.11
ATM-230ENST00000640388 UPF1Q92900 1129 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATM-230ENST00000640388 CAMK2BQ13554 666 aa8.1□□□□□ -1.11
ATM-230ENST00000640388 EMILIN3Q9NT22 766 aa8.1□□□□□ -1.11
ATM-230ENST00000640388 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
ATM-230ENST00000640388 HCSTQ9UBK5 93 aa8.09□□□□□ -1.11
ATM-230ENST00000640388 PSEN2P49810 448 aa8.07□□□□□ -1.12
ATM-230ENST00000640388 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
ATM-230ENST00000640388 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
ATM-230ENST00000640388 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
ATM-230ENST00000640388 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
ATM-230ENST00000640388 KCNH8Q96L42 1107 aa8.05□□□□□ -1.12
ATM-230ENST00000640388 ANO8Q9HCE9 1232 aaPredicted RBP8.05□□□□□ -1.12
ATM-230ENST00000640388 DPYSL4O14531 572 aa8.04□□□□□ -1.12
ATM-230ENST00000640388 FOSBP53539 338 aa8.04□□□□□ -1.12
ATM-230ENST00000640388 P3H3Q8IVL6 736 aa8.03□□□□□ -1.12
ATM-230ENST00000640388 JPH4Q96JJ6 628 aa8.02□□□□□ -1.13
ATM-230ENST00000640388 KCNK17Q96T54 332 aa8.02□□□□□ -1.13
ATM-230ENST00000640388 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
ATM-230ENST00000640388 EVI5O60447 810 aa8.01□□□□□ -1.13
ATM-230ENST00000640388 ZNF454Q8N9F8 522 aa8.01□□□□□ -1.13
ATM-230ENST00000640388 ARHGEF1Q92888 912 aaKnown RBP8.01□□□□□ -1.13
ATM-230ENST00000640388 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
ATM-230ENST00000640388 ARIH1Q9Y4X5 557 aaPredicted RBP8□□□□□ -1.13
ATM-230ENST00000640388 PTPREP23469 700 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms