RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 NEO1Q92859 1461 aa23.6■■□□□ 1.37
PAX6-268ENST00000640287 CFAP74Q9C0B2 1584 aa23.6■■□□□ 1.37
PAX6-268ENST00000640287 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
PAX6-268ENST00000640287 CFDP1Q9UEE9 299 aaPredicted RBP23.59■■□□□ 1.37
PAX6-268ENST00000640287 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.37
PAX6-268ENST00000640287 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
PAX6-268ENST00000640287 AKNAQ7Z591 1439 aa23.57■■□□□ 1.36
PAX6-268ENST00000640287 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
PAX6-268ENST00000640287 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
PAX6-268ENST00000640287 KDM6BO15054 1643 aa23.55■■□□□ 1.36
PAX6-268ENST00000640287 ADGRL1O94910 1474 aa23.52■■□□□ 1.36
PAX6-268ENST00000640287 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
PAX6-268ENST00000640287 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
PAX6-268ENST00000640287 COL17A1Q9UMD9 1497 aaPredicted RBP23.47■■□□□ 1.35
PAX6-268ENST00000640287 DENND4BO75064 1496 aaPredicted RBP23.46■■□□□ 1.35
PAX6-268ENST00000640287 SAMD9LQ8IVG5 1584 aa23.46■■□□□ 1.35
PAX6-268ENST00000640287 RAPGEF3O95398 923 aa23.45■■□□□ 1.34
PAX6-268ENST00000640287 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
PAX6-268ENST00000640287 ABCC1P33527 1531 aa23.44■■□□□ 1.34
PAX6-268ENST00000640287 MIA2Q96PC5 1412 aa23.43■■□□□ 1.34
PAX6-268ENST00000640287 PLEKHH2Q8IVE3 1493 aa23.43■■□□□ 1.34
PAX6-268ENST00000640287 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
PAX6-268ENST00000640287 SYCP2Q9BX26 1530 aa23.42■■□□□ 1.34
PAX6-268ENST00000640287 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
PAX6-268ENST00000640287 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
PAX6-268ENST00000640287 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
PAX6-268ENST00000640287 KIAA1107Q9UPP5 1409 aa23.39■■□□□ 1.33
PAX6-268ENST00000640287 ARHGEF12Q9NZN5 1544 aa23.39■■□□□ 1.33
PAX6-268ENST00000640287 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
PAX6-268ENST00000640287 FRMPD1Q5SYB0 1578 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 AFAP1Q8N556 730 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 TRAPPC8Q9Y2L5 1435 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 MYT1LQ9UL68 1186 aa23.36■■□□□ 1.33
PAX6-268ENST00000640287 FAM50AQ14320 339 aaKnown RBP23.34■■□□□ 1.33
PAX6-268ENST00000640287 TCOF1Q13428 1488 aaKnown RBP23.31■■□□□ 1.32
PAX6-268ENST00000640287 MBD5Q9P267 1494 aa23.31■■□□□ 1.32
PAX6-268ENST00000640287 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
PAX6-268ENST00000640287 KDM5CP41229 1560 aa23.29■■□□□ 1.32
PAX6-268ENST00000640287 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
PAX6-268ENST00000640287 ZMYM4Q5VZL5 1548 aa23.29■■□□□ 1.32
PAX6-268ENST00000640287 SPAG9O60271 1321 aaKnown RBP23.27■■□□□ 1.32
PAX6-268ENST00000640287 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
PAX6-268ENST00000640287 HECW2Q9P2P5 1572 aa23.25■■□□□ 1.31
PAX6-268ENST00000640287 MAGI2Q86UL8 1455 aa23.25■■□□□ 1.31
PAX6-268ENST00000640287 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
PAX6-268ENST00000640287 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
PAX6-268ENST00000640287 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
PAX6-268ENST00000640287 MLH3Q9UHC1 1453 aa23.22■■□□□ 1.31
PAX6-268ENST00000640287 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
PAX6-268ENST00000640287 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
PAX6-268ENST00000640287 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
PAX6-268ENST00000640287 DAPK1P53355 1430 aa23.2■■□□□ 1.3
PAX6-268ENST00000640287 ATP7AQ04656 1500 aa23.2■■□□□ 1.3
PAX6-268ENST00000640287 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
PAX6-268ENST00000640287 ABCC5O15440 1437 aa23.19■■□□□ 1.3
PAX6-268ENST00000640287 ITGAEP38570 1179 aa23.18■■□□□ 1.3
PAX6-268ENST00000640287 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
PAX6-268ENST00000640287 INO80Q9ULG1 1556 aaPredicted RBP23.17■■□□□ 1.3
PAX6-268ENST00000640287 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
PAX6-268ENST00000640287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.16■■□□□ 1.3
PAX6-268ENST00000640287 RTEL1-TNFRSF6BF6WH68 1400 aa23.16■■□□□ 1.3
PAX6-268ENST00000640287 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.3
PAX6-268ENST00000640287 ABCA6Q8N139 1617 aa23.14■■□□□ 1.3
PAX6-268ENST00000640287 ATP10AO60312 1499 aa23.14■■□□□ 1.3
PAX6-268ENST00000640287 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.3
PAX6-268ENST00000640287 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
PAX6-268ENST00000640287 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
PAX6-268ENST00000640287 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
PAX6-268ENST00000640287 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
PAX6-268ENST00000640287 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
PAX6-268ENST00000640287 RRP7BPQ9NSQ0 103 aa23.06■■□□□ 1.28
PAX6-268ENST00000640287 A2MP01023 1474 aa23.06■■□□□ 1.28
PAX6-268ENST00000640287 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
PAX6-268ENST00000640287 PTPRKQ15262 1439 aa23.06■■□□□ 1.28
PAX6-268ENST00000640287 KIF15Q9NS87 1388 aa23.04■■□□□ 1.28
PAX6-268ENST00000640287 PLXNC1O60486 1568 aa23.04■■□□□ 1.28
PAX6-268ENST00000640287 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
PAX6-268ENST00000640287 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
PAX6-268ENST00000640287 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
PAX6-268ENST00000640287 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
PAX6-268ENST00000640287 MLECQ14165 292 aa23■■□□□ 1.27
PAX6-268ENST00000640287 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
PAX6-268ENST00000640287 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
PAX6-268ENST00000640287 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
PAX6-268ENST00000640287 AGLP35573 1532 aa22.96■■□□□ 1.27
PAX6-268ENST00000640287 KIF3BO15066 747 aa22.95■■□□□ 1.26
PAX6-268ENST00000640287 ERBINQ96RT1 1412 aa22.93■■□□□ 1.26
PAX6-268ENST00000640287 GGT6Q6P531 493 aa22.92■■□□□ 1.26
PAX6-268ENST00000640287 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
PAX6-268ENST00000640287 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
PAX6-268ENST00000640287 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
PAX6-268ENST00000640287 ESF1Q9H501 851 aaKnown RBP22.88■■□□□ 1.25
PAX6-268ENST00000640287 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PAX6-268ENST00000640287 NAIPQ13075 1403 aa22.84■■□□□ 1.25
PAX6-268ENST00000640287 KDM4FA0A1W2PPD8 638 aa22.84■■□□□ 1.25
PAX6-268ENST00000640287 ADAMTSL3P82987 1691 aa22.83■■□□□ 1.25
PAX6-268ENST00000640287 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
PAX6-268ENST00000640287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms