RNA–Protein interactions for RNA: ENST00000639921.1

GFAP-235, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,226 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-235ENST00000639921 EFCAB2Q5VUJ9 269 aa19.42■□□□□ 0.7
GFAP-235ENST00000639921 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
GFAP-235ENST00000639921 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
GFAP-235ENST00000639921 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
GFAP-235ENST00000639921 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.69
GFAP-235ENST00000639921 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
GFAP-235ENST00000639921 DENND4BO75064 1496 aaPredicted RBP19.36■□□□□ 0.69
GFAP-235ENST00000639921 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
GFAP-235ENST00000639921 KANK4Q5T7N3 995 aaPredicted RBP19.36■□□□□ 0.69
GFAP-235ENST00000639921 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
GFAP-235ENST00000639921 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
GFAP-235ENST00000639921 RAPGEF3O95398 923 aa19.34■□□□□ 0.69
GFAP-235ENST00000639921 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
GFAP-235ENST00000639921 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
GFAP-235ENST00000639921 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
GFAP-235ENST00000639921 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
GFAP-235ENST00000639921 SAMD9LQ8IVG5 1584 aa19.29■□□□□ 0.68
GFAP-235ENST00000639921 ABCC1P33527 1531 aa19.29■□□□□ 0.68
GFAP-235ENST00000639921 POGZQ7Z3K3 1410 aa19.28■□□□□ 0.68
GFAP-235ENST00000639921 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
GFAP-235ENST00000639921 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
GFAP-235ENST00000639921 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
GFAP-235ENST00000639921 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
GFAP-235ENST00000639921 ZMYM4Q5VZL5 1548 aa19.24■□□□□ 0.67
GFAP-235ENST00000639921 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
GFAP-235ENST00000639921 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
GFAP-235ENST00000639921 ZFYVE16Q7Z3T8 1539 aa19.21■□□□□ 0.67
GFAP-235ENST00000639921 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
GFAP-235ENST00000639921 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
GFAP-235ENST00000639921 ZNF644Q9H582 1327 aaPredicted RBP19.21■□□□□ 0.67
GFAP-235ENST00000639921 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
GFAP-235ENST00000639921 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
GFAP-235ENST00000639921 ARHGEF40Q8TER5 1519 aa19.2■□□□□ 0.66
GFAP-235ENST00000639921 KDM5CP41229 1560 aa19.19■□□□□ 0.66
GFAP-235ENST00000639921 HECW2Q9P2P5 1572 aa19.19■□□□□ 0.66
GFAP-235ENST00000639921 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
GFAP-235ENST00000639921 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
GFAP-235ENST00000639921 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
GFAP-235ENST00000639921 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
GFAP-235ENST00000639921 YEATS2Q9ULM3 1422 aa19.16■□□□□ 0.66
GFAP-235ENST00000639921 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.65
GFAP-235ENST00000639921 SPAG9O60271 1321 aaKnown RBP19.13■□□□□ 0.65
GFAP-235ENST00000639921 MLH3Q9UHC1 1453 aa19.12■□□□□ 0.65
GFAP-235ENST00000639921 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
GFAP-235ENST00000639921 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
GFAP-235ENST00000639921 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
GFAP-235ENST00000639921 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
GFAP-235ENST00000639921 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
GFAP-235ENST00000639921 MBD5Q9P267 1494 aa19.1■□□□□ 0.65
GFAP-235ENST00000639921 ARHGEF5Q12774 1597 aa19.1■□□□□ 0.65
GFAP-235ENST00000639921 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
GFAP-235ENST00000639921 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
GFAP-235ENST00000639921 ATP10AO60312 1499 aa19.09■□□□□ 0.65
GFAP-235ENST00000639921 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
GFAP-235ENST00000639921 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.65
GFAP-235ENST00000639921 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.65
GFAP-235ENST00000639921 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
GFAP-235ENST00000639921 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
GFAP-235ENST00000639921 TCOF1Q13428 1488 aaKnown RBP19.05■□□□□ 0.64
GFAP-235ENST00000639921 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
GFAP-235ENST00000639921 SIGLEC1Q9BZZ2 1709 aa19.03■□□□□ 0.64
GFAP-235ENST00000639921 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
GFAP-235ENST00000639921 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.64
GFAP-235ENST00000639921 ADGBQ8N7X0 1667 aa19.02■□□□□ 0.64
GFAP-235ENST00000639921 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
GFAP-235ENST00000639921 DNMT1P26358 1616 aaKnown RBP19.01■□□□□ 0.63
GFAP-235ENST00000639921 KDM4FA0A1W2PPD8 638 aa19.01■□□□□ 0.63
GFAP-235ENST00000639921 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
GFAP-235ENST00000639921 REREQ9P2R6 1566 aa19.01■□□□□ 0.63
GFAP-235ENST00000639921 MLECQ14165 292 aa19■□□□□ 0.63
GFAP-235ENST00000639921 MAST1Q9Y2H9 1570 aa18.99■□□□□ 0.63
GFAP-235ENST00000639921 A2MP01023 1474 aa18.98■□□□□ 0.63
GFAP-235ENST00000639921 DAPK1P53355 1430 aa18.98■□□□□ 0.63
GFAP-235ENST00000639921 ABCC5O15440 1437 aa18.97■□□□□ 0.63
GFAP-235ENST00000639921 ADAMTSL3P82987 1691 aa18.96■□□□□ 0.63
GFAP-235ENST00000639921 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
GFAP-235ENST00000639921 AGLP35573 1532 aa18.95■□□□□ 0.62
GFAP-235ENST00000639921 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
GFAP-235ENST00000639921 MADDQ8WXG6 1647 aa18.94■□□□□ 0.62
GFAP-235ENST00000639921 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
GFAP-235ENST00000639921 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
GFAP-235ENST00000639921 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
GFAP-235ENST00000639921 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
GFAP-235ENST00000639921 ITGAEP38570 1179 aa18.9■□□□□ 0.62
GFAP-235ENST00000639921 ESF1Q9H501 851 aaKnown RBP18.89■□□□□ 0.61
GFAP-235ENST00000639921 ANKRD30AQ9BXX3 1397 aa18.89■□□□□ 0.61
GFAP-235ENST00000639921 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
GFAP-235ENST00000639921 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
GFAP-235ENST00000639921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.61
GFAP-235ENST00000639921 KIF15Q9NS87 1388 aa18.87■□□□□ 0.61
GFAP-235ENST00000639921 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
GFAP-235ENST00000639921 KIF3BO15066 747 aa18.86■□□□□ 0.61
GFAP-235ENST00000639921 GGT6Q6P531 493 aa18.86■□□□□ 0.61
GFAP-235ENST00000639921 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
GFAP-235ENST00000639921 PTPRMP28827 1452 aa18.84■□□□□ 0.61
GFAP-235ENST00000639921 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
GFAP-235ENST00000639921 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
GFAP-235ENST00000639921 NCOA1Q15788 1441 aa18.82■□□□□ 0.6
GFAP-235ENST00000639921 PTPRKQ15262 1439 aa18.81■□□□□ 0.6
GFAP-235ENST00000639921 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms