RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
PAX6-249ENST00000639034 RAPGEF3O95398 923 aa19.23■□□□□ 0.67
PAX6-249ENST00000639034 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
PAX6-249ENST00000639034 CDC42BPAQ5VT25 1732 aa19.23■□□□□ 0.67
PAX6-249ENST00000639034 RICTORQ6R327 1708 aa19.23■□□□□ 0.67
PAX6-249ENST00000639034 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
PAX6-249ENST00000639034 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
PAX6-249ENST00000639034 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
PAX6-249ENST00000639034 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
PAX6-249ENST00000639034 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
PAX6-249ENST00000639034 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
PAX6-249ENST00000639034 GPATCH8Q9UKJ3 1502 aaKnown RBP19.17■□□□□ 0.66
PAX6-249ENST00000639034 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
PAX6-249ENST00000639034 ABCC1P33527 1531 aa19.15■□□□□ 0.66
PAX6-249ENST00000639034 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
PAX6-249ENST00000639034 LRRC9Q6ZRR7 1453 aa19.15■□□□□ 0.66
PAX6-249ENST00000639034 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
PAX6-249ENST00000639034 APLP2Q06481 763 aa19.15■□□□□ 0.66
PAX6-249ENST00000639034 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.65
PAX6-249ENST00000639034 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
PAX6-249ENST00000639034 CFDP1Q9UEE9 299 aaPredicted RBP19.12■□□□□ 0.65
PAX6-249ENST00000639034 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
PAX6-249ENST00000639034 SAMD9LQ8IVG5 1584 aa19.11■□□□□ 0.65
PAX6-249ENST00000639034 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
PAX6-249ENST00000639034 KDM5CP41229 1560 aa19.1■□□□□ 0.65
PAX6-249ENST00000639034 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
PAX6-249ENST00000639034 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
PAX6-249ENST00000639034 HECW2Q9P2P5 1572 aa19.07■□□□□ 0.64
PAX6-249ENST00000639034 ARHGEF12Q9NZN5 1544 aa19.07■□□□□ 0.64
PAX6-249ENST00000639034 YEATS2Q9ULM3 1422 aa19.06■□□□□ 0.64
PAX6-249ENST00000639034 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
PAX6-249ENST00000639034 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
PAX6-249ENST00000639034 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
PAX6-249ENST00000639034 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
PAX6-249ENST00000639034 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
PAX6-249ENST00000639034 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
PAX6-249ENST00000639034 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
PAX6-249ENST00000639034 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
PAX6-249ENST00000639034 ARID4BQ4LE39 1312 aaPredicted RBP19.01■□□□□ 0.63
PAX6-249ENST00000639034 ATP10AO60312 1499 aa19.01■□□□□ 0.63
PAX6-249ENST00000639034 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
PAX6-249ENST00000639034 HNRNPMP52272 730 aaKnown RBP eCLIP18.99■□□□□ 0.63
PAX6-249ENST00000639034 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
PAX6-249ENST00000639034 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
PAX6-249ENST00000639034 BCORL1Q5H9F3 1711 aa18.98■□□□□ 0.63
PAX6-249ENST00000639034 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
PAX6-249ENST00000639034 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
PAX6-249ENST00000639034 KIDINS220Q9ULH0 1771 aa18.97■□□□□ 0.63
PAX6-249ENST00000639034 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
PAX6-249ENST00000639034 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
PAX6-249ENST00000639034 REREQ9P2R6 1566 aa18.96■□□□□ 0.63
PAX6-249ENST00000639034 MIA2Q96PC5 1412 aa18.96■□□□□ 0.62
PAX6-249ENST00000639034 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
PAX6-249ENST00000639034 MBD5Q9P267 1494 aa18.95■□□□□ 0.62
PAX6-249ENST00000639034 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
PAX6-249ENST00000639034 INO80Q9ULG1 1556 aaPredicted RBP18.95■□□□□ 0.62
PAX6-249ENST00000639034 SIGLEC1Q9BZZ2 1709 aa18.94■□□□□ 0.62
PAX6-249ENST00000639034 CCDC141Q6ZP82 1450 aa18.93■□□□□ 0.62
PAX6-249ENST00000639034 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
PAX6-249ENST00000639034 ARHGEF5Q12774 1597 aa18.91■□□□□ 0.62
PAX6-249ENST00000639034 MADDQ8WXG6 1647 aa18.9■□□□□ 0.62
PAX6-249ENST00000639034 AGLP35573 1532 aa18.88■□□□□ 0.61
PAX6-249ENST00000639034 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
PAX6-249ENST00000639034 ADGBQ8N7X0 1667 aa18.87■□□□□ 0.61
PAX6-249ENST00000639034 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
PAX6-249ENST00000639034 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
PAX6-249ENST00000639034 MLECQ14165 292 aa18.85■□□□□ 0.61
PAX6-249ENST00000639034 FER1L4A9Z1Z3 1794 aa18.85■□□□□ 0.61
PAX6-249ENST00000639034 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
PAX6-249ENST00000639034 PTPRMP28827 1452 aa18.84■□□□□ 0.61
PAX6-249ENST00000639034 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
PAX6-249ENST00000639034 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
PAX6-249ENST00000639034 A2MP01023 1474 aa18.84■□□□□ 0.61
PAX6-249ENST00000639034 PLXNC1O60486 1568 aa18.83■□□□□ 0.61
PAX6-249ENST00000639034 TCOF1Q13428 1488 aaKnown RBP18.82■□□□□ 0.6
PAX6-249ENST00000639034 MAST1Q9Y2H9 1570 aa18.81■□□□□ 0.6
PAX6-249ENST00000639034 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
PAX6-249ENST00000639034 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
PAX6-249ENST00000639034 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.6
PAX6-249ENST00000639034 DHX29Q7Z478 1369 aaKnown RBP18.76■□□□□ 0.59
PAX6-249ENST00000639034 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
PAX6-249ENST00000639034 DAPK1P53355 1430 aa18.75■□□□□ 0.59
PAX6-249ENST00000639034 ABCC5O15440 1437 aa18.74■□□□□ 0.59
PAX6-249ENST00000639034 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
PAX6-249ENST00000639034 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
PAX6-249ENST00000639034 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
PAX6-249ENST00000639034 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
PAX6-249ENST00000639034 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
PAX6-249ENST00000639034 GGT6Q6P531 493 aa18.68■□□□□ 0.58
PAX6-249ENST00000639034 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
PAX6-249ENST00000639034 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
PAX6-249ENST00000639034 C3P01024 1663 aa18.67■□□□□ 0.58
PAX6-249ENST00000639034 KIF3BO15066 747 aa18.67■□□□□ 0.58
PAX6-249ENST00000639034 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
PAX6-249ENST00000639034 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
PAX6-249ENST00000639034 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
PAX6-249ENST00000639034 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
PAX6-249ENST00000639034 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
PAX6-249ENST00000639034 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
PAX6-249ENST00000639034 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms