RNA–Protein interactions for RNA: ENST00000638588.1

KCNQ3-206, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-206ENST00000638588 ROCK1Q13464 1354 aa17.13■□□□□ 0.33
KCNQ3-206ENST00000638588 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
KCNQ3-206ENST00000638588 MSH5O43196 834 aa17.12■□□□□ 0.33
KCNQ3-206ENST00000638588 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
KCNQ3-206ENST00000638588 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
KCNQ3-206ENST00000638588 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
KCNQ3-206ENST00000638588 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
KCNQ3-206ENST00000638588 DAPK1P53355 1430 aa17.09■□□□□ 0.33
KCNQ3-206ENST00000638588 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
KCNQ3-206ENST00000638588 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
KCNQ3-206ENST00000638588 TEX14Q8IWB6 1497 aa17.09■□□□□ 0.33
KCNQ3-206ENST00000638588 ADAMTS12P58397 1594 aa17.08■□□□□ 0.33
KCNQ3-206ENST00000638588 FOXD1Q16676 465 aa17.08■□□□□ 0.33
KCNQ3-206ENST00000638588 DNMT1P26358 1616 aaKnown RBP17.08■□□□□ 0.32
KCNQ3-206ENST00000638588 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.32
KCNQ3-206ENST00000638588 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
KCNQ3-206ENST00000638588 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
KCNQ3-206ENST00000638588 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
KCNQ3-206ENST00000638588 ABCC5O15440 1437 aa17.05■□□□□ 0.32
KCNQ3-206ENST00000638588 SPATA31E1Q6ZUB1 1445 aa17.05■□□□□ 0.32
KCNQ3-206ENST00000638588 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
KCNQ3-206ENST00000638588 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
KCNQ3-206ENST00000638588 ARID3CA6NKF2 412 aa17■□□□□ 0.31
KCNQ3-206ENST00000638588 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
KCNQ3-206ENST00000638588 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
KCNQ3-206ENST00000638588 PZPP20742 1482 aa16.95■□□□□ 0.3
KCNQ3-206ENST00000638588 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
KCNQ3-206ENST00000638588 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
KCNQ3-206ENST00000638588 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
KCNQ3-206ENST00000638588 NUP153P49790 1475 aaKnown RBP16.95■□□□□ 0.3
KCNQ3-206ENST00000638588 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
KCNQ3-206ENST00000638588 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
KCNQ3-206ENST00000638588 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
KCNQ3-206ENST00000638588 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
KCNQ3-206ENST00000638588 DHX29Q7Z478 1369 aaKnown RBP16.93■□□□□ 0.3
KCNQ3-206ENST00000638588 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
KCNQ3-206ENST00000638588 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 KIF14Q15058 1648 aa16.91■□□□□ 0.3
KCNQ3-206ENST00000638588 USP47Q96K76 1375 aa16.9■□□□□ 0.3
KCNQ3-206ENST00000638588 NUDCQ9Y266 331 aa16.89■□□□□ 0.3
KCNQ3-206ENST00000638588 ADGRL2O95490 1459 aa16.89■□□□□ 0.29
KCNQ3-206ENST00000638588 TROQ12816 1431 aaPredicted RBP16.89■□□□□ 0.29
KCNQ3-206ENST00000638588 BCORL1Q5H9F3 1711 aa16.88■□□□□ 0.29
KCNQ3-206ENST00000638588 KDM5CP41229 1560 aa16.87■□□□□ 0.29
KCNQ3-206ENST00000638588 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
KCNQ3-206ENST00000638588 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
KCNQ3-206ENST00000638588 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
KCNQ3-206ENST00000638588 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
KCNQ3-206ENST00000638588 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
KCNQ3-206ENST00000638588 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
KCNQ3-206ENST00000638588 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
KCNQ3-206ENST00000638588 ADCY10Q96PN6 1610 aa16.84■□□□□ 0.29
KCNQ3-206ENST00000638588 GPATCH8Q9UKJ3 1502 aaKnown RBP16.84■□□□□ 0.29
KCNQ3-206ENST00000638588 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
KCNQ3-206ENST00000638588 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
KCNQ3-206ENST00000638588 PKD2Q13563 968 aa16.83■□□□□ 0.28
KCNQ3-206ENST00000638588 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.28
KCNQ3-206ENST00000638588 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
KCNQ3-206ENST00000638588 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
KCNQ3-206ENST00000638588 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
KCNQ3-206ENST00000638588 RALGAPBQ86X10 1494 aa16.82■□□□□ 0.28
KCNQ3-206ENST00000638588 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
KCNQ3-206ENST00000638588 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
KCNQ3-206ENST00000638588 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
KCNQ3-206ENST00000638588 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
KCNQ3-206ENST00000638588 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
KCNQ3-206ENST00000638588 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
KCNQ3-206ENST00000638588 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
KCNQ3-206ENST00000638588 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
KCNQ3-206ENST00000638588 ZNF777Q9ULD5 760 aaPredicted RBP16.78■□□□□ 0.28
KCNQ3-206ENST00000638588 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
KCNQ3-206ENST00000638588 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
KCNQ3-206ENST00000638588 SHANK2Q9UPX8 1470 aa16.75■□□□□ 0.27
KCNQ3-206ENST00000638588 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
KCNQ3-206ENST00000638588 PLB1Q6P1J6 1458 aa16.75■□□□□ 0.27
KCNQ3-206ENST00000638588 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
KCNQ3-206ENST00000638588 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
KCNQ3-206ENST00000638588 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
KCNQ3-206ENST00000638588 NUP155O75694 1391 aa16.73■□□□□ 0.27
KCNQ3-206ENST00000638588 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
KCNQ3-206ENST00000638588 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
KCNQ3-206ENST00000638588 RALBP1Q15311 655 aa16.72■□□□□ 0.27
KCNQ3-206ENST00000638588 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
KCNQ3-206ENST00000638588 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
KCNQ3-206ENST00000638588 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.26
KCNQ3-206ENST00000638588 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
KCNQ3-206ENST00000638588 MAGI1Q96QZ7 1491 aaPredicted RBP16.7■□□□□ 0.26
KCNQ3-206ENST00000638588 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
KCNQ3-206ENST00000638588 E9PCH4 1651 aa16.69■□□□□ 0.26
KCNQ3-206ENST00000638588 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
KCNQ3-206ENST00000638588 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
KCNQ3-206ENST00000638588 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
KCNQ3-206ENST00000638588 ABCC10Q5T3U5 1492 aa16.67■□□□□ 0.26
KCNQ3-206ENST00000638588 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
KCNQ3-206ENST00000638588 PTPRGP23470 1445 aa16.66■□□□□ 0.26
KCNQ3-206ENST00000638588 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms