RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 DOK7Q18PE1 504 aa7.07□□□□□ -1.28
GYPB-216ENST00000638448 ZNF710Q8N1W2 664 aa7.05□□□□□ -1.28
GYPB-216ENST00000638448 POTEB3A0JP26 581 aa7.04□□□□□ -1.28
GYPB-216ENST00000638448 PPP1R37O75864 691 aa7.04□□□□□ -1.28
GYPB-216ENST00000638448 CHGAP10645 457 aaKnown RBP7.04□□□□□ -1.28
GYPB-216ENST00000638448 POTEBQ6S5H4 581 aa7.04□□□□□ -1.28
GYPB-216ENST00000638448 FAM205CA6NFA0 338 aa7.03□□□□□ -1.28
GYPB-216ENST00000638448 HOXB1P14653 301 aaPredicted RBP7.03□□□□□ -1.28
GYPB-216ENST00000638448 HS3ST6Q96QI5 342 aa7.03□□□□□ -1.28
GYPB-216ENST00000638448 RIMBP2O15034 1052 aa7.02□□□□□ -1.29
GYPB-216ENST00000638448 C2orf72A6NCS6 295 aa7.01□□□□□ -1.29
GYPB-216ENST00000638448 KIF3CO14782 793 aa7.01□□□□□ -1.29
GYPB-216ENST00000638448 NKX1-1Q15270 411 aaPredicted RBP7□□□□□ -1.29
GYPB-216ENST00000638448 PLCB2Q00722 1185 aa6.99□□□□□ -1.29
GYPB-216ENST00000638448 ZSWIM6Q9HCJ5 1215 aa6.99□□□□□ -1.29
GYPB-216ENST00000638448 DNAJC5Q9H3Z4 198 aa6.98□□□□□ -1.29
GYPB-216ENST00000638448 GPR153Q6NV75 609 aa6.97□□□□□ -1.29
GYPB-216ENST00000638448 TMC2Q8TDI7 906 aa6.97□□□□□ -1.29
GYPB-216ENST00000638448 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
GYPB-216ENST00000638448 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
GYPB-216ENST00000638448 ERBB3P21860 1342 aa6.97□□□□□ -1.29
GYPB-216ENST00000638448 ARSIQ5FYB1 569 aa6.96□□□□□ -1.3
GYPB-216ENST00000638448 DCAF8L2P0C7V8 631 aa6.95□□□□□ -1.3
GYPB-216ENST00000638448 VARS2Q5ST30 1063 aaKnown RBP6.95□□□□□ -1.3
GYPB-216ENST00000638448 KHSRPQ92945 711 aaKnown RBP eCLIP6.95□□□□□ -1.33e-6■■■□□ 17.7
GYPB-216ENST00000638448 SPNS2Q8IVW8 549 aa6.93□□□□□ -1.3
GYPB-216ENST00000638448 NUDT7P0C024 238 aa6.9□□□□□ -1.3
GYPB-216ENST00000638448 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
GYPB-216ENST00000638448 RYDENQ9NUL5 291 aaKnown RBP6.9□□□□□ -1.3
GYPB-216ENST00000638448 PCDHGA4Q9Y5G9 962 aa6.9□□□□□ -1.3
GYPB-216ENST00000638448 ZNF316A6NFI3 1004 aaPredicted RBP6.89□□□□□ -1.31
GYPB-216ENST00000638448 SLC34A2O95436 690 aa6.89□□□□□ -1.31
GYPB-216ENST00000638448 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
GYPB-216ENST00000638448 GTPBP6O43824 516 aaPredicted RBP6.88□□□□□ -1.31
GYPB-216ENST00000638448 FOXK1P85037 733 aa6.88□□□□□ -1.31
GYPB-216ENST00000638448 DSG2Q14126 1118 aa6.88□□□□□ -1.31
GYPB-216ENST00000638448 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
GYPB-216ENST00000638448 ZNF687Q8N1G0 1237 aa6.87□□□□□ -1.31
GYPB-216ENST00000638448 CRISPLD2Q9H0B8 497 aa6.85□□□□□ -1.31
GYPB-216ENST00000638448 LHX6Q9UPM6 363 aa6.85□□□□□ -1.31
GYPB-216ENST00000638448 NCKAP5LQ9HCH0 1330 aa6.84□□□□□ -1.31
GYPB-216ENST00000638448 PTCD2Q8WV60 388 aaKnown RBP6.84□□□□□ -1.31
GYPB-216ENST00000638448 KDM4FA0A1W2PPD8 638 aa6.82□□□□□ -1.32
GYPB-216ENST00000638448 PPP1R15BQ5SWA1 713 aa6.81□□□□□ -1.32
GYPB-216ENST00000638448 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
GYPB-216ENST00000638448 BBXQ8WY36 941 aaPredicted RBP6.81□□□□□ -1.32
GYPB-216ENST00000638448 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
GYPB-216ENST00000638448 POTEEQ6S8J3 1075 aa6.79□□□□□ -1.32
GYPB-216ENST00000638448 OXER1Q8TDS5 423 aa6.79□□□□□ -1.32
GYPB-216ENST00000638448 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.79□□□□□ -1.32
GYPB-216ENST00000638448 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
GYPB-216ENST00000638448 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
GYPB-216ENST00000638448 CADPS2Q86UW7 1296 aa6.78□□□□□ -1.32
GYPB-216ENST00000638448 AXIN2Q9Y2T1 843 aa6.78□□□□□ -1.32
GYPB-216ENST00000638448 PDE4AP27815 886 aa6.77□□□□□ -1.33
GYPB-216ENST00000638448 PBX2P40425 430 aa6.77□□□□□ -1.33
GYPB-216ENST00000638448 ANKRD13DQ6ZTN6 518 aa6.77□□□□□ -1.33
GYPB-216ENST00000638448 LARP6Q9BRS8 491 aaKnown RBP6.77□□□□□ -1.33
GYPB-216ENST00000638448 PSDA5PKW4 1024 aaPredicted RBP6.76□□□□□ -1.33
GYPB-216ENST00000638448 TBC1D12O60347 775 aa6.76□□□□□ -1.33
GYPB-216ENST00000638448 MFSD10Q14728 455 aa6.76□□□□□ -1.33
GYPB-216ENST00000638448 RNF166Q96A37 237 aaPredicted RBP6.76□□□□□ -1.33
GYPB-216ENST00000638448 DDX27Q96GQ7 796 aaKnown RBP6.76□□□□□ -1.33
GYPB-216ENST00000638448 BCANQ96GW7 911 aa6.76□□□□□ -1.33
GYPB-216ENST00000638448 MYT1LQ9UL68 1186 aa6.75□□□□□ -1.33
GYPB-216ENST00000638448 PPP4R3BQ5MIZ7 849 aa6.73□□□□□ -1.33
GYPB-216ENST00000638448 ARHGAP33O14559 1287 aa6.72□□□□□ -1.33
GYPB-216ENST00000638448 PTGER2P43116 358 aa6.72□□□□□ -1.33
GYPB-216ENST00000638448 PSEN2P49810 448 aa6.71□□□□□ -1.34
GYPB-216ENST00000638448 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
GYPB-216ENST00000638448 EMILIN3Q9NT22 766 aa6.71□□□□□ -1.34
GYPB-216ENST00000638448 ADGRD1Q6QNK2 874 aa6.7□□□□□ -1.34
GYPB-216ENST00000638448 ZNF454Q8N9F8 522 aa6.7□□□□□ -1.34
GYPB-216ENST00000638448 KCNK17Q96T54 332 aa6.7□□□□□ -1.34
GYPB-216ENST00000638448 EVI5O60447 810 aa6.69□□□□□ -1.34
GYPB-216ENST00000638448 FOSBP53539 338 aa6.68□□□□□ -1.34
GYPB-216ENST00000638448 SPRYD3Q8NCJ5 442 aa6.67□□□□□ -1.34
GYPB-216ENST00000638448 JPH4Q96JJ6 628 aa6.67□□□□□ -1.34
GYPB-216ENST00000638448 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
GYPB-216ENST00000638448 PAXIP1Q6ZW49 1069 aaPredicted RBP6.66□□□□□ -1.34
GYPB-216ENST00000638448 BCL2L12Q9HB09 334 aa6.66□□□□□ -1.34
GYPB-216ENST00000638448 ANO8Q9HCE9 1232 aaPredicted RBP6.66□□□□□ -1.34
GYPB-216ENST00000638448 TK2O00142 265 aa6.65□□□□□ -1.34
GYPB-216ENST00000638448 CAMK2BQ13554 666 aa6.65□□□□□ -1.34
GYPB-216ENST00000638448 KCNH8Q96L42 1107 aa6.65□□□□□ -1.34
GYPB-216ENST00000638448 HRO43593 1189 aa6.64□□□□□ -1.35
GYPB-216ENST00000638448 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
GYPB-216ENST00000638448 ADAM33Q9BZ11 813 aa6.64□□□□□ -1.35
GYPB-216ENST00000638448 DPYSL4O14531 572 aa6.63□□□□□ -1.35
GYPB-216ENST00000638448 ZDHHC16Q969W1 377 aa6.63□□□□□ -1.35
GYPB-216ENST00000638448 KDM2AQ9Y2K7 1162 aa6.63□□□□□ -1.35
GYPB-216ENST00000638448 PTPREP23469 700 aa6.62□□□□□ -1.35
GYPB-216ENST00000638448 VPS9D1Q9Y2B5 631 aa6.62□□□□□ -1.35
GYPB-216ENST00000638448 PCDHGA10Q9Y5H3 936 aa6.61□□□□□ -1.35
GYPB-216ENST00000638448 ZBED2Q9BTP6 218 aa6.59□□□□□ -1.35
GYPB-216ENST00000638448 PHF14O94880 888 aa6.58□□□□□ -1.36
GYPB-216ENST00000638448 TYW1BQ6NUM6 668 aa6.58□□□□□ -1.36
GYPB-216ENST00000638448 KCTD12Q96CX2 325 aaKnown RBP6.58□□□□□ -1.36
GYPB-216ENST00000638448 SLC4A5Q9BY07 1137 aa6.58□□□□□ -1.36
GYPB-216ENST00000638448 PPP1R3GB7ZBB8 358 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms