RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 CAMSAP2Q08AD1 1489 aa25.27■■□□□ 1.64
CLCN2-220ENST00000637538 ABCA9Q8IUA7 1624 aa25.27■■□□□ 1.64
CLCN2-220ENST00000637538 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
CLCN2-220ENST00000637538 PTPRKQ15262 1439 aa25.25■■□□□ 1.63
CLCN2-220ENST00000637538 DIP2BQ9P265 1576 aa25.25■■□□□ 1.63
CLCN2-220ENST00000637538 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
CLCN2-220ENST00000637538 ARAP3Q8WWN8 1544 aa25.23■■□□□ 1.63
CLCN2-220ENST00000637538 PLCH2O75038 1416 aa25.22■■□□□ 1.63
CLCN2-220ENST00000637538 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
CLCN2-220ENST00000637538 KIF13AQ9H1H9 1805 aa25.22■■□□□ 1.63
CLCN2-220ENST00000637538 ITGAEP38570 1179 aa25.22■■□□□ 1.63
CLCN2-220ENST00000637538 SAMD9LQ8IVG5 1584 aa25.2■■□□□ 1.62
CLCN2-220ENST00000637538 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
CLCN2-220ENST00000637538 ABCC5O15440 1437 aa25.17■■□□□ 1.62
CLCN2-220ENST00000637538 DAPK1P53355 1430 aa25.17■■□□□ 1.62
CLCN2-220ENST00000637538 ARHGAP5Q13017 1502 aa25.17■■□□□ 1.62
CLCN2-220ENST00000637538 GLI2P10070 1586 aa25.16■■□□□ 1.62
CLCN2-220ENST00000637538 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
CLCN2-220ENST00000637538 ARHGEF5Q12774 1597 aa25.13■■□□□ 1.61
CLCN2-220ENST00000637538 MBD5Q9P267 1494 aa25.13■■□□□ 1.61
CLCN2-220ENST00000637538 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
CLCN2-220ENST00000637538 AKNAQ7Z591 1439 aa25.11■■□□□ 1.61
CLCN2-220ENST00000637538 HFM1A2PYH4 1435 aa25.1■■□□□ 1.61
CLCN2-220ENST00000637538 KIAA1107Q9UPP5 1409 aa25.1■■□□□ 1.61
CLCN2-220ENST00000637538 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
CLCN2-220ENST00000637538 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
CLCN2-220ENST00000637538 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
CLCN2-220ENST00000637538 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
CLCN2-220ENST00000637538 ABCC1P33527 1531 aa25.07■■□□□ 1.6
CLCN2-220ENST00000637538 EFCAB2Q5VUJ9 269 aa25.07■■□□□ 1.6
CLCN2-220ENST00000637538 SYCP2Q9BX26 1530 aa25.06■■□□□ 1.6
CLCN2-220ENST00000637538 NAIPQ13075 1403 aa25.05■■□□□ 1.6
CLCN2-220ENST00000637538 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
CLCN2-220ENST00000637538 ADGRL2O95490 1459 aa25.04■■□□□ 1.6
CLCN2-220ENST00000637538 RAB3GAP2Q9H2M9 1393 aa25.04■■□□□ 1.6
CLCN2-220ENST00000637538 ARHGEF12Q9NZN5 1544 aa25.04■■□□□ 1.6
CLCN2-220ENST00000637538 FANCAO15360 1455 aa25.03■■□□□ 1.6
CLCN2-220ENST00000637538 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
CLCN2-220ENST00000637538 ADGBQ8N7X0 1667 aa25.03■■□□□ 1.6
CLCN2-220ENST00000637538 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
CLCN2-220ENST00000637538 CD109Q6YHK3 1445 aa25.02■■□□□ 1.6
CLCN2-220ENST00000637538 HRCP23327 699 aa25.02■■□□□ 1.6
CLCN2-220ENST00000637538 HNRNPMP52272 730 aaKnown RBP eCLIP25.01■■□□□ 1.59
CLCN2-220ENST00000637538 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
CLCN2-220ENST00000637538 CHIC2Q9UKJ5 165 aa25■■□□□ 1.59
CLCN2-220ENST00000637538 MAST1Q9Y2H9 1570 aa24.99■■□□□ 1.59
CLCN2-220ENST00000637538 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
CLCN2-220ENST00000637538 C9orf84Q5VXU9 1444 aa24.98■■□□□ 1.59
CLCN2-220ENST00000637538 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
CLCN2-220ENST00000637538 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
CLCN2-220ENST00000637538 TSPOAP1O95153 1857 aa24.93■■□□□ 1.58
CLCN2-220ENST00000637538 TEX14Q8IWB6 1497 aa24.93■■□□□ 1.58
CLCN2-220ENST00000637538 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
CLCN2-220ENST00000637538 PPRC1Q5VV67 1664 aaKnown RBP24.92■■□□□ 1.58
CLCN2-220ENST00000637538 KDM6BO15054 1643 aa24.91■■□□□ 1.58
CLCN2-220ENST00000637538 ADGRL1O94910 1474 aa24.91■■□□□ 1.58
CLCN2-220ENST00000637538 DHX57Q6P158 1386 aaKnown RBP24.91■■□□□ 1.58
CLCN2-220ENST00000637538 ANKRD30AQ9BXX3 1397 aa24.91■■□□□ 1.58
CLCN2-220ENST00000637538 NEO1Q92859 1461 aa24.9■■□□□ 1.58
CLCN2-220ENST00000637538 TSPY4P0CV99 314 aa24.9■■□□□ 1.58
CLCN2-220ENST00000637538 TSPY10P0CW01 314 aa24.9■■□□□ 1.58
CLCN2-220ENST00000637538 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
CLCN2-220ENST00000637538 PLXNC1O60486 1568 aa24.87■■□□□ 1.57
CLCN2-220ENST00000637538 SCAPERQ9BY12 1400 aa24.87■■□□□ 1.57
CLCN2-220ENST00000637538 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
CLCN2-220ENST00000637538 ZFYVE16Q7Z3T8 1539 aa24.82■■□□□ 1.56
CLCN2-220ENST00000637538 INO80Q9ULG1 1556 aaPredicted RBP24.82■■□□□ 1.56
CLCN2-220ENST00000637538 KIF15Q9NS87 1388 aa24.81■■□□□ 1.56
CLCN2-220ENST00000637538 POGZQ7Z3K3 1410 aa24.8■■□□□ 1.56
CLCN2-220ENST00000637538 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
CLCN2-220ENST00000637538 COL17A1Q9UMD9 1497 aaPredicted RBP24.8■■□□□ 1.56
CLCN2-220ENST00000637538 KDM5CP41229 1560 aa24.79■■□□□ 1.56
CLCN2-220ENST00000637538 ZNF518AQ6AHZ1 1483 aa24.79■■□□□ 1.56
CLCN2-220ENST00000637538 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
CLCN2-220ENST00000637538 CLSPNQ9HAW4 1339 aa24.77■■□□□ 1.56
CLCN2-220ENST00000637538 ACIN1Q9UKV3 1341 aaKnown RBP24.77■■□□□ 1.56
CLCN2-220ENST00000637538 ATP7AQ04656 1500 aa24.76■■□□□ 1.55
CLCN2-220ENST00000637538 SPAG9O60271 1321 aaKnown RBP24.76■■□□□ 1.55
CLCN2-220ENST00000637538 ZEB1P37275 1124 aaPredicted RBP24.75■■□□□ 1.55
CLCN2-220ENST00000637538 DUOX2Q9NRD8 1548 aa24.74■■□□□ 1.55
CLCN2-220ENST00000637538 DENND4BO75064 1496 aaPredicted RBP24.73■■□□□ 1.55
CLCN2-220ENST00000637538 RICTORQ6R327 1708 aa24.72■■□□□ 1.55
CLCN2-220ENST00000637538 KIDINS220Q9ULH0 1771 aa24.71■■□□□ 1.55
CLCN2-220ENST00000637538 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
CLCN2-220ENST00000637538 FRMPD1Q5SYB0 1578 aa24.69■■□□□ 1.54
CLCN2-220ENST00000637538 ERBINQ96RT1 1412 aa24.69■■□□□ 1.54
CLCN2-220ENST00000637538 HECW2Q9P2P5 1572 aa24.68■■□□□ 1.54
CLCN2-220ENST00000637538 KDM5DQ9BY66 1539 aa24.67■■□□□ 1.54
CLCN2-220ENST00000637538 PZPP20742 1482 aa24.64■■□□□ 1.54
CLCN2-220ENST00000637538 UNC13BO14795 1591 aa24.64■■□□□ 1.53
CLCN2-220ENST00000637538 ZMYM4Q5VZL5 1548 aa24.63■■□□□ 1.53
CLCN2-220ENST00000637538 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
CLCN2-220ENST00000637538 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
CLCN2-220ENST00000637538 MAGI2Q86UL8 1455 aa24.61■■□□□ 1.53
CLCN2-220ENST00000637538 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
CLCN2-220ENST00000637538 MPHOSPH9Q99550 1183 aa24.59■■□□□ 1.53
CLCN2-220ENST00000637538 DHX29Q7Z478 1369 aaKnown RBP24.58■■□□□ 1.53
CLCN2-220ENST00000637538 EIF2AK4Q9P2K8 1649 aaKnown RBP24.58■■□□□ 1.53
CLCN2-220ENST00000637538 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
CLCN2-220ENST00000637538 DEPDC5O75140 1603 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms